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. Author manuscript; available in PMC: 2009 Jun 27.
Published in final edited form as: J Mol Biol. 2008 May 7;380(1):181–192. doi: 10.1016/j.jmb.2008.04.073

Table 1.

Summary of data collection and refinement statistics

Data collection Unliganded PAE2072 AMP-bound PAE2072
Space group P21212 P41212
Cell dimensions
a (Å), b (Å), c (Å) 57.8, 98.5, 51.6 55.7, 55.7, 336.4
Resolution (Å) 2.10 2.35
Rmerge# (%) 9.4 (45.2) 6.4 (37.3)
I/σI 17.7 (4.18) 9.79 (2.67)
Completeness (%) 96.8 (95.7) 93.7 (99.6)
Redundancy 6.3 (6.0) 2.6 (2.7)
Radiation wavelength (Å) 1.5418 1.00
Refinement
Resolution (Å) 51.50–2.10 (2.16–2.10) 18.91–2.35 (2.41–2.35)
Total no. working reflections 16361 19638
Total no. test reflections 873 1118
Rwork/Rfree (%) 19.7/24.3 23.9/29.4
No. atoms
 Protein 2089 3984
 Ligand/ion 39 195
 Water 161 66
Average B-factors (Å2)
 Protein 27.4 60.2
 Ligand/ion 33.9 46.9
 Water 33.6 45.5
R.M.S. deviations
 Bond lengths (Å) 0.008 0.005
 Bond angles 1.2º 1.1º
Ramachandran plot statistics (%)
 Residues in most favored regions 95.7 96.7
 Residues in additional allowed regions 4.3 3.3
 Residues in generously allowed regions 0 0
 Residues in disallowed regions 0 0
PDB ID 2RIH 2RIF

Values in parentheses are for the last shell.

#

Rmerge=hkliIi(hkl)I(hkl)¯/hkliIi(hkl)

Rwork = Σ|FobsFcalc |/ΣFobs

Rfree = Σ|FobsFcalc|/ΣFobs, calculated using a random set containing 5% of reflections that were not included throughout refinement