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. 2008 Nov 28;4(11):e1000275. doi: 10.1371/journal.pgen.1000275

Table 1. Microarray experiments included in the study.

Array Experiment Cell line(s) Antibody Aim
Genome-wide analyses
NimbleGen Human HG17 Promoter Array set ChIP-chip U937-AE and U937-Mt anti-HA Identification of AML1/ETO binding sites in human promoters
Affymetrix HG-U133 Plus v.2 Gene expression U937-AE and U937-Mt — Identification of genes whose expression is regulated by AML1/ETO
Analyses on human chromosome 19
NimbleGen Chr. 19 Array ChIP-chip U937-AE and U937-Mt anti-HA Analysis of AML1/ETO binding in different genomic locations
NimbleGen Chr. 19 Array U937-AE and U937-Mt anti-ETO Analysis of AML1/ETO binding in different genomic locations
NimbleGen Chr. 19 Array U937-AE and U937-Mt anti-AML1 Correlation of AML1 and AML1/ETO binding patterns
NimbleGen Chr. 19 Array U937-AE and U937-Mt anti-HEB Correlation of HEB and AML1/ETO binding patterns
NimbleGen Chr. 19 Array U937-AE anti-H3K4me3 Correlation of AML1/ETO binding pattern with a mark for active transcription
NimbleGen Chr. 19 Array Gene expression U937-AE and U937-Mt — Correlation of AML1/ETO, AML1 and HEB binding patterns with gene expression