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. 2008 Oct 23;9:452. doi: 10.1186/1471-2105-9-452

Figure 1.

Figure 1

Affinity parameters calculated using single nucleotide model. Affinity parameters calculated using equation 1 for the human genome U133 Latin Square. Panel A is for Experiment 11 Replica 2 and panel B shows an average of the parameters across all the 42 chips. K represents the position of each nucleotide along the probe length. Affinity parameters calculated using equation 2 are shown as solid lines. Higher affinity (Y-axis) indicates brighter signal.