Table 2.
Allele frequencies of the common polymorphisms in all populations with deviations from Hardy/Weinberg Equilibrium (HWE).
| Gene | Allele | African American | European American | Ghanaian African | Han Chinese | Papua New Guinea |
|---|---|---|---|---|---|---|
| Arntl | ||||||
| ss95215854 | T | 1.00 | 0.99 | 0.93 | 1.00 | 1.00 |
| ss95215855 | A | 1.00 | 0.97 | 1.00 | 1.00 | 1.00 |
| Arntl2 | ||||||
| rs5797225 | GTT (7) | 0.01 | - | - | - | - |
| GTT (8) | 0.49 | 0.71 | 0.51 | 0.48 | 0.71 | |
| GTT (9) | 0.50 | 0.29 | 0.46 | 0.51 | 0.28 | |
| GTT (10) | - | - | 0.03 | 0.01 | 0.01 | |
| rs7137588 | G | 0.86 | 0.73 | 0.87 | 0.93 | 0.75 |
| rs11048972 | A | 0.98 | 0.94 | 0.87 | 0.98 | 1.00 |
| rs10548381 | +/CTA | 0.93+ | 0.90 | 0.98 | 0.98 | 0.99 |
| rs4964059 | A | 0.91 | 0.67 | 0.88 | 0.43 | 0.43* |
| Clock | ||||||
| rs1801260 | T | 0.86 | 0.74* | 0.83 | 0.92 | 0.83 |
| Per2 | ||||||
| rs2304669 | A | 0.97 | 0.87 | 0.99 | 0.94 | 0.94 |
| rs2304670 | G | 0.90 | 0.93 | 0.87 | 0.94 | 1.00 |
| rs2304671 | G | 0.96 | 0.93 | 0.96 | 0.89 | 1.00 |
| Per3 | ||||||
| rs228696 | C | 0.95* | 0.97 | 0.98 | 1.00 | 1.00 |
| rs228697 | C | 0.98 | 0.99 | 1.00 | 0.95 | 0.83 |
| AB047536 | 4-repeat | 0.59 | 0.66 | 0.64 | 0.81+ | 0.41 |
| rs10462021 | A | 0.93 | 0.83 | 0.96 | 1.00 | 0.98 |
| AANAT | ||||||
| rs4238989 | G | 0.74 | 0.53 | 0.87 | 0.53 | 0.51 |