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. Author manuscript; available in PMC: 2008 Nov 8.
Published in final edited form as: Nat Biotechnol. 2005 Oct 9;23(11):1435–1439. doi: 10.1038/nbt1153

Table 1.

The predicted splicing parameters and RPA results

Exon/intron/exon combination
53/53/54 56/56/57 60/60/61 63/63/64
CVa 0.90, 0.60 0.84, 0.97 0.94, 0.98 0.95, 0.90
ΔDGo37b −7.7 −10.4 −11.7 −10.6
Total RNA 68.7 ± 27.8  2.4 ± 1.2c 342.2 ± 24.3d 159.9 ± 9.4c
Unspliced RNA 20.0 ± 9.1  1.6 ± 1.2  87.1 ± 11.2d  20.4 ± 9.1
Spliced RNA 48.8 ± 20.6 0.8 ± 0.2 255.1 ± 20.6d 139.5 ± 6.4d
S/U ratioe 2.5 ± 0.3 1.0 ± 0.6 3.0 ± 0.4   7.1 ± 0.9d
% of splicing 71.1 31.3c 74.5 87.2c
a

Consensus splicing values (CV) at the 5′ and the 3′ ends of each indicated intron (from ref. 18). A higher value indicates a better match.

b

Free energy exchange during U1snRNA annealing (Kcal/mole). The more negative the value, the more favorable the annealing.

c

Values are statistically different from each other in the same category (P < 0.014).

d

Values are statistically different from other exon/intron/exon combinations in the same category (P < 0.016).

e

The ratio of spliced (S) to unspliced (U) RNA transcript.