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. Author manuscript; available in PMC: 2009 Sep 23.
Published in final edited form as: Biochemistry. 2008 Aug 29;47(38):10084–10098. doi: 10.1021/bi8003928

Table 2.

NHERF1 PDZ1 binding affinity depends on peptide length.

Peptidea Sequenceb Kd (nM) Ki (nM)
F*C-CFTR4 F*CDTRL 949 ± 89
C-CFTR4 CDTRL 1520 ± 78
F*-CFTR6 F*VQDTRL 365 ± 35
C-CFTR6 CVQDTRL 670 ± 97
F*-CFTR10 F*TEEEVQDTRL 279 ± 21
C-CFTR10 CTEEEVQDTRL 597 ± 77
F*GG-CFTR16 F*GGAALKEETEEEVQDTRL 116 ± 10
CGG-CFTR16 CGGAALKEETEEEVQDTRL 209 ± 64

Kd values were determined by fluorescence anisotropy measurements following titration of the indicated fluorescently labeled sequences with increasing concentrations of N1P1. Ki values were determined by titration of the indicated peptide sequences in the presence of 30 nM F*-CFTR6 and 1 μM N1P1 and determining the fluorescence anisotropy of the reporter ligand. Data were fit using equations 3 and 4 (Kd) or equation 5 (Ki).

a

F*- and F*GG represent fluorescein groups coupled covalently to the peptide amino-terminus. F*C- represents a fluorescein group maleimide-coupled to an N-terminal cysteine side chain. C- and CGG- represent unmodified N-terminal linkers. Subscript indicates length of CFTR C-terminal sequence included.

b

CFTR sequences are underlined.

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