Table 2.
NHERF1 PDZ1 binding affinity depends on peptide length.
Peptidea | Sequenceb | Kd (nM) | Ki (nM) |
---|---|---|---|
F*C-CFTR4 | F*CDTRL | 949 ± 89 | |
C-CFTR4 | CDTRL | 1520 ± 78 | |
F*-CFTR6 | F*VQDTRL | 365 ± 35 | |
C-CFTR6 | CVQDTRL | 670 ± 97 | |
F*-CFTR10 | F*TEEEVQDTRL | 279 ± 21 | |
C-CFTR10 | CTEEEVQDTRL | 597 ± 77 | |
F*GG-CFTR16 | F*GGAALKEETEEEVQDTRL | 116 ± 10 | |
CGG-CFTR16 | CGGAALKEETEEEVQDTRL | 209 ± 64 |
Kd values were determined by fluorescence anisotropy measurements following titration of the indicated fluorescently labeled sequences with increasing concentrations of N1P1. Ki values were determined by titration of the indicated peptide sequences in the presence of 30 nM F*-CFTR6 and 1 μM N1P1 and determining the fluorescence anisotropy of the reporter ligand. Data were fit using equations 3 and 4 (Kd) or equation 5 (Ki).
F*- and F*GG represent fluorescein groups coupled covalently to the peptide amino-terminus. F*C- represents a fluorescein group maleimide-coupled to an N-terminal cysteine side chain. C- and CGG- represent unmodified N-terminal linkers. Subscript indicates length of CFTR C-terminal sequence included.
CFTR sequences are underlined.