. Author manuscript; available in PMC: 2009 Oct 25.

Published in final edited form as: Virology. 2008 Sep 2;380(2):388–393. doi: 10.1016/j.virol.2008.07.025

Table 2.

General characteristics of three conserved, putative promoter elements in three chlorella viruses.

	Percentage of genes with motif in promoter region			Ratio of motif hits in the promoter region to total hits in the genome			Predicted promoter location	Percentage of promoter motifs found within predicted promoter location
	PBCV-1	NY-2A	MT325	PBCV-1	NY-2A	MT325	(nt from ATG start)	PBCV-1	NY-2A	MT325
ARNTTAANA	25%	22%	12%	0.44	0.49	0.37	-15 to -45	64%	66%	65%
AATGACA	16%	18%	8%	0.54	0.53	0.25	-60 to -90	44%	37%	33%
GTNGATAYR	13%	14%	11%	0.28	0.22	0.21	-50 to -80	39%	38%	70%