TABLE 1.
Oligonucleotides designed for this study
Primer name | Oligonucleotide sequence (5′-3′)a |
---|---|
EVS62 | CTT CAG ATC CTC TAC GCC GGA CGC |
EVS90 | GGG AGA TCT GTC GACCTG TCT CTT ATA CAC ATC TGC GGC CGC TCT AGA ACT AGT GGA TCC |
EVS91 | GGG AGA TCT GTC TCT TAT ACA CAT CTA AGG TAA TCA GGA GCT AAG GAA GCT AAA ATG G |
EVS92 | CCC GGA TCC GTA GCG TCC TGA ACG GAA CCT TTC CCG |
M13LKF | CTA GGG GCC CTG TAA AAC GAC GGC CAG TC |
M13LKR | CTA GGA CTG GCC GTC GTT TTA CAG GGC CC |
Optimized 19-bp Tn5 mosaic ends (5′-CTG TCT CTT ATA CAC ATC T-3′) are indicated by single underlines in EVS90 and EVS91. The M13 Forward priming site (5′-TGT AAA ACG ACG GCC AGT-3′) and its complement formed by annealing M13LKF and M13LKR together are underlined in those sequences. Translational stops (5′-TAA-3′), present in all three potential reading frames in EVS91, are shown in boldface. Key restriction enzyme recognition sequences are in italics, including ApaI (5′-GGGCC/C-3′) in M13LKF and M13LKR, BamHI (5′-G/GATCC-3′) in EVS92, BglII (5′-A/GATCT-3′) in EVS90 and EVS91, and SalI (5′-G/TCGAC-3′) in EVS90.