TABLE 5.
Type or species (no. of sequences) | Ra | RMb | Coalescence simulationsc
|
||
---|---|---|---|---|---|
Confidence intervald | P (RM ≤ observed RM)e | Avg RMf | |||
B. japonicum I (7) | 125 | 13 | 5.0, 15.0 | 0.922 | 9.98 |
B. japonicum Ia (21) | 0.001 | 1 | 0.0, 0.0 | 1.0 | 0.002 |
B. elkanii (18) | 9.3 | 15 | 2.0, 9.0 | 1.0 | 5.0 |
B. liaoningense (15) | 0.99 | 2.0 | 0.0, 2.0 | 0.98 | 0.683 |
B. yuanmingense (32) | 2.6 | 20 | 0.0, 5.0 | 1.0 | 2.372 |
Estimate of the population recombination parameter R (13) corrected for haploid organisms.
Observed minimum number of recombination events (16).
Neutral coalescence simulations (104) given the number of segregating sites, with an intermediate level of recombination.
Confidence interval (lower limit, upper limit) for RM under the neutral coalescent process.
Probability that RM is less than or equal to the observed RM under the neutral coalescent process.
Average value of RM under the neutral coalescent process.