Table 1. futA and futB genotypes in an H. pylori population colonizing human gastric mucosa.
futA | futB | |||||
Subisolate | Type1 | C-tract2 | Heptads3 | Type | C-tract | Heptads |
67:15 | A | 13 − | 2 | B | 13 + | 8 |
67:16 | A | 12 − | 2 | B | 13 + | 8 |
67:17 | A* | 13 − | 2 | B | 13 + | 8 |
67:18 | A* | 14 + | 5 | B | 13 + | 7 |
67:19 | A* | 13 − | 2 | B | 13 + | 8 |
67:20 | B | 12 − | 17 | B-A | 13 + | 5 |
67:21 | A | 12 − | 2 | B | 13 + | 8 |
67:22 | A | 12 − | 2 | B | 13 + | 8 |
67:23 | A | 13 − | 2 | B | 13 + | 8 |
67:24 | A | 13 − | 2 | B | 13 + | 8 |
67:25 | A | 12 − | 2 | B | 13 + | 8 |
67:26 | A | 12 − | 2 | B | 13 + | 8 |
67:27 | B | 12 − | 15 | B-A | 13 + | 5 |
67:28 | A | 12 − | 2 | B | 13 + | 8 |
67:29 | A | 13 − | 2 | B | 13 + | 8 |
67:30 | A | 13 − | 2 | B | 13 + | 8 |
67:31 | A | 12 − | 2 | B | 13 + | 8 |
67:32 | A | 13 − | 2 | B | 13 + | 8 |
67:33 | A | 13 − | 2 | B | 13 + | 8 |
67:34 | A | 12 − | 2 | B | 13 + | 7 |
fut allele at locus, based on sequencing of 200 bp at the 5′ of gene. The types A and B are referred to the genetic sequence present at the corresponding locus in strain 67:21. A* differs from A at two nucleotide positions, according to Figure 7.
Number of C-residues in 5′ homopolymeric tract and reading frame of the gene (+ in frame, − out of frame)
Number of C-terminal heptad-repeats