Table 3.

Numbers of genes called significant, and of the false discoveries estimated by SAM and RAM from the observed microarray data sets of 7129 genes in 4 replicate experiments provided in SAM software.

SAM (S0= 3.46 at percentile = 0.01)				RAM
Δi	N(i)	N̂f(i)	R̂FD(i) %	Δi	N(i)	N̂f(i)	R̂FD(i) %
0.00676	4046	3736.4	92.3	0.04641	6834	5060	74.0
0.02311	4011	3682.4	91.8	0.10520	6392	4261	66.7
0.03355	3952	3621.4	91.6	0.16402	5956	3964	66.6
0.04874	3933	3591.4	91.3	0.22289	5539	1993	36.0
0.07252	3893	3551.5	91.2	0.28185	5144	1656	32.2
0.08402	3882	3536.5	91.1	0.34092	4736	1389	29.3
0.08731	3855	3499.5	90.7	0.40013	4188	1430	34.1
0.08885	3305	2955.7	89.4	0.45952	3752	1043	27.8
0.08977	3211	2879.7	89.6	0.51911	3245	553	17.0
0.09132	1936	1716.2	88.6	0.57893	2660	617	23.2
0.09278	1751	1529.3	87.3	0.63901	1795	100	5.6
0.09538	1739	1510.3	86.8	0.69939	1480	110	7.4
0.09691	1718	1487.3	86.5	0.76010	1220	71	5.8
0.09886	1703	1464.3	85.9	0.82118	783	61	7.8
0.10159	752	568.2	75.5	0.88266	310	17	5.5
0.10943	739	550.2	74.4	0.94457	6161	2	3.3
0.11610	599	436.8	72.9	1.00697	58	2	3.4
0.12068	531	383.3	72.1	1.06988	57	1	1.8
0.13922	410	268.3	65.4	1.13336	57	1	1.8
0.15164	352	218.4	62.0
0.18234	268	155.9	58.1
0.19807	261	147.9	56.6
0.20716	213	116.9	54.9
0.33398	167	64.9	38.9
0.43301	124	39.9	32.2
0.57814	88	19.4	22.1
0.65578	74	12.9	17.5
0.76837	62	9.9	16.1
0.86358	46	5.9	13.0
1.24876	36	2.9	8.3
1.38245	26	1.9	7.6
1.60219	21	0.9	4.7
2.03175	12	0.9	8.3
2.43241	11	0.9	9.0
2.69035	3	0.9	33.3
4.19555	0	0.9	NA