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. Author manuscript; available in PMC: 2008 Nov 24.
Published in final edited form as: Mol Microbiol. 2007 Oct 9;66(4):930–947. doi: 10.1111/j.1365-2958.2007.05966.x

Table 1.

Proteins with similar domain architecture as N. gonorrhoeae TraI

Protein origin Predicted Function Length (bp) Identify/Range (aa) Acc. Number
Neisseria gonorrhoeae str. MS11 Relaxase 850 100%/850 AAW83058.1
Acidovorax avenae ssp. citrulli str. AAC00-1 Phosphohydrolase 861 35%/26 YP_971114.1
Acidovorax avenae ssp. citrulli str. AAC00-1 Relaxase 623 47%/86 YP_968947.1
Acidovorax sp. JS42 Relaxase 627 36%/115 YP_985545.1
Acidovorax sp. JS42 Relaxase 614 36%/100 ABM42340.1
Acidovorax sp. JS42 Relaxase 610 26%/284 YP_985678.1
Methylibium petroleiphilum str. PM1 Hypothetical 612 36%/100 YP_001021595.1
Burkholderia xenovorans str. LB400 Hypothetical 615 39%/101 YP_559832.1
Ralstonia metallidurans str. CH34 Relaxase 680 37%/115 YP_584510.1
Azoarcus sp. EbN1 Hypothetical 711 54%/42 YP_157225.1
Azoarcus sp. EbN1 Hypothetical 623 46%/88 YP_158431.1
Azoarcus sp. EbN1 Hypothetical 604 46%/88 YP_158356.1
Nitrosomonas eutropha str. C91 Relaxase 621 37%/100 ABI58357.1
Haemophilus somnus str. 129PT Hypothetical 640 37%/94 YP_718205.1
Haemophilus influenzae str. 86-028NP Hypothetical 638 46%/77 YP_247808.1
Haemophilus influenzae plasmid pICEhin1056 Hypothetical 635 27%/393 CAF29070.1
Haemophilus influenzae str. R2866 HD hydrolase 603 27%/393 ZP_00157643.1
Haemophilus ducreyi str. 35000HP Hypothetical 217 41%/86 NP_873395.1
Xanthomonas campestris pv. campestris ATCC33913 Hypothetical 340 37%/103 NP_638468.1
Xanthomonas campestris pv. campestris str. 8004 Hypothetical 642 44%/92 YP_243101.1
Xanthomonas campestris pv. vesicatoria str. 85-10 Hypothetical 610 35%/100 YP_364087.1
Xanthomonas axonopodis pv. citri str. 306 Hypothetical 633 38%/107 NP_642513.1
Xylella fastidiosa str. 9a5c Hypothetical 616 34%/101 NP_299042.1
Pseudomonas syringae str. BR2R Hypothetical 638 35%/103 AAL99262.1
Pseudomonas syringae pv. syringae str. B728a Relaxase 318 35%/103 YP_233835.1
Pseudomonas syringae pv. syringae str. B728a Relaxase 634 35%/103 YP_234511.1
Pseudomonas syringae pv. phaseolicola HD hydrolase 578 35%/103 CAI36140.1
Pseudomonas syringae pv. tomato str. DC3000 Hypothetical 642 76%/17 NP_790676.1
Pseudomonas aeruginosa str. 6077 Hypothetical 643 40%/100 ABD94612.1
Pseudomonas aeruginosa clone C plasmid pKLC102 Hypothetical 639 41%/100 AAP22591.1
Pseudomonas aeruginosa clone C Hypothetical 608 40%/100 AAP94681.1
Pseudomonas aeruginosa str. PA14 Pathogenesis-related 639 40%100 AAP84130.1
Pseudomonas aeruginosa str. SG17M Hypothetical 600 37%/100 AAN62266.1
Pseudomonas aeruginosa clone C Hypothetical 630 37%/115 AAN62129.1
Pseudomonas aeruginosa str. 2192 HD hydrolase 312 40%/100 ZP_00971291.1
Pseudomonas aeruginosa str. 2192 HD hydrolase 602 37%/115 ZP_00974810.1
Pseudomonas aeruginosa str. PACS2 Hypothetical 614 38%/101 ZP_01366009.1
Pseudomonas resinovorans str. CA10 plasmid pCAR1 Nickase 900 70%/27 NP_758664.1
Pseudomonas fluorescence str. PfO-1 Hypothetical 575 47%/76 YP_348763.1
Pseudomonas fluorescence str. Pf-5 Hypothetical 628 39%/100 YP_261833.1
Pseudomonas putida str. F1 Hypothetical 595 44%/97 ZP_00898124.1
Azotobacter vinelandii str. AvOP Relaxase 627 40%/108 ZP_00419624.1
Yersinia pestis bv. orientalis str. IP275 HD hydrolase 992 66%/36 ZP_01175343.1
Providencia rettgeri str. R391 Relaxase 716 42%/87 AAM08003.1
Proteus vulgaris str. UR-75 plasmid Rts 1 DNA helicase 892 69%/26 NP_640161.1
Salmonella enterica ssp. enterica sv. typhi plasmid pHCM1 Hypothetical 1011 44%/68 NP_569454.1
Salmonella typhi plasmid R27 Relaxase 1011 44%/68 NP_058333.1
Escherichia coli plasmid pAPEC-01-R sv. 01:K1 Relaxase 1050 66%/27 ABF67837.1
Serratia mercescens plasmid R478 Hypothetical 1050 66%/27 NP_941280.1
Marinobacter aquaeoli str. VT8 Relaxase 624 48%/80 YP_957144.1
Shewanella sp. W3-18-1 plasmid 1 Phosphohydrolase 716 42%/87 YP_962502.1
Shewanella sp. ANA-3 Relaxase 941 29%/164 YP_863780.1
Vibrio cholerae Relaxase 716 42%/87 ABA87024.1
Vibrio cholerae str. MO10 Relaxase 716 42%/87 EAZ47260.1