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. Author manuscript; available in PMC: 2009 Oct 1.
Published in final edited form as: DNA Repair (Amst). 2008 Jul 21;7(10):1624–1635. doi: 10.1016/j.dnarep.2008.06.006

Table 5.

NHEJ events recovered from cells treated with RTX

Clone name Deletion size (bp) Microhomologya
4ar 4 none
2ar 4b none
5ar 4 none
6ar 7 a
8cr 7 none
7ar 10 a
6cr 22c none
10ar 28 ggg
8ar 28 ggg
2br 31 c
5cr 49 none
3br 55 ctt
10br 100d none
1ar 244 c
1br 244 gc
5br 403 c
9ar 1141 accc
a

For NHEJ junctions displaying microhomology (segments of sequence identity) at the joined DNA termini, the actual sequence of microhomology shared between the joined termini is shown.

b

Clone 2ar displayed a 4 bp deletion plus a run of 12 consecutive T residues inserted at the DSB site.

c

Clone 6cr displayed a net deletion of 22 bp, including an insertion of a three bp sequence (tta) at the DSB site.

d

Clone 10br displayed a net deletion of 100 bp, including an insertion of a 16 bp sequence (taataactgaaaacag) at the DSB site.