Table 4.

Number of sets found as significantly regulated across the 18 experiments

Method	α = 0.05	α = 0.005	α = 0.0005	α = 0.0002
FET 3	32	6	3	3
FET 2	78	23	11	11
FET 1	196	85	58	50
FET 1/2	338	109	54	45
GSEA-NR	522	137	61	50
SUMSQ-NR	311	64	34	31
ABSSUM-NR	444	124	66	57
SUM-NR	573	142	79	67
MAXMEAN-NR	613	181	91	74