Table 1.
Gene Name | Gene Symbol | Cellular Function | Primer Sequence (5'-3') | Reference | Accession # |
bactin1 | bactin1 | Cytoskeleton | F) CGAGCAGGAGATGGGAACC | 14 | AF057040 |
R) CAACGGAAACGCTCATTGC | |||||
tubulin, alpha 1 | tuba1 | Cytoskeleton | F) CCTGCTGGGAACTGTATTGT | * | AF029250 |
R) TCAATGAGTTCCTTGCCAAT | |||||
glyceraldehyde-3-phosphate dehydrogenase | gapdh | Glycolysis enzyme | F) GTGGAGTCTACTGGTGTCTTC | 15 | BC083506 |
R) GTGCAGGAGGCATTGCTTACA | |||||
glucose-6-phosphate dehydrogenase | g6pd | Glycolysis enzyme | F) GTCCCGAAAGGCTCCACTC | 9 | BM182602 |
R) CCTCCGCTTTCCTCTC | |||||
TATA-box-binding protein | tbp | Transcription | F) CGGTGGATCCTGCGAATTA | * | NM_200096 |
R) TGACAGGTTATGAAGCAAAACAACA | |||||
beta-2-microglobulin | b2m | Major histocompatibility complex | F) GCCTTCACCCCAGAGAAAGG | * | BC062841 |
R) GCGGTTGGGATTTACATGTTG | |||||
elongation factor 1-alpha | elfa | Translation | F) CTTCTCAGGCTGACTGTGC | 16 | AY422992 |
R) CCGCTAGCATTACCCTCC | |||||
18s ribosomal RNA | 18s | Ribosome subunit | F) TCGCTAGTTGGCATCGTTTATG | 17 | BX296557 |
R) CGGAGGTTCGAAGACGATCA | |||||
cytochrome P450, family 19, subfamily A, polypeptide 1b | cyp19a1b | Steroid biosynthesis | F) AAAGAGTTACTAATAAAGATCCACCGGTAT | 13 | AF226619 |
R) TCCACAAGCTTTCCCATTTCA | |||||
cytochrome P450, family 1, subfamily A | cyp1a | Xenobiotic metabolism | F) GCATTACGATACGTTCGATAAGGAC | 18 | NM_131879 |
R) GCTCCGAATAGGTCATTGACGAT |
The first 8 were candidate housekeeping genes. cyp19a1b and cyp1a, targets of ER and AhR mediated signal transduction, respectively, were used to tests effects of normalization on apparent gene expression. Asterisks (*) indicate primers designed in this study.