Skip to main content
The Yale Journal of Biology and Medicine logoLink to The Yale Journal of Biology and Medicine
. 1983 Sep-Dec;56(5-6):357–366.

Characterization of the mycoplasma genome.

S Razin, M F Barile, R Harasawa, D Amikam, G Glaser
PMCID: PMC2590562  PMID: 6206652

Abstract

Recent advances on the properties of the mycoplasma genome, including size, base composition, replication, extrachromosomal DNA, and transfer of genetic material are briefly reviewed, with emphasis on their phylogenetic implications. The use of cleavage patterns of the mycoplasma genome by restriction endonucleases as "finger-prints" indicating genetic relatedness among strains is discussed. The data support the notion that strains of mycoplasma species of strict host and tissue specificity exhibit marked genetic homogeneity, suggesting a clonal origin for some species. The regions of the mycoplasma genome carrying the ribosomal RNA (rRNA) genes have been studied using restriction endonucleases, cloning, and hybridization procedures. The mycoplasmal rRNA cistrons cross-hybridized among themselves, and with the seven rRNA cistrons of Escherichia coli, demonstrating the marked conservation of structure during evolution of this part of the procaryotic genome. In most of the mollicutes tested so far the number of rRNA cistrons is two, but a few species appear to carry only one rRNA cistron in their genome.

Full text

PDF
362

Images in this article

Selected References

These references are in PubMed. This may not be the complete list of references from this article.

  1. Allen T. C. Base composition and genome size of Mycoplasma meleagridis deoxyribonucleic acid. J Gen Microbiol. 1971 Dec;69(2):285–286. doi: 10.1099/00221287-69-2-285. [DOI] [PubMed] [Google Scholar]
  2. Amikam D., Razin S., Glaser G. Ribosomal RNA genes in Mycoplasma. Nucleic Acids Res. 1982 Jul 24;10(14):4215–4222. doi: 10.1093/nar/10.14.4215. [DOI] [PMC free article] [PubMed] [Google Scholar]
  3. Askaa G., Christiansen C., Erno H. Bovine mycoplasmas: genome size and base composition of DNA. J Gen Microbiol. 1973 Apr;75(2):283–286. doi: 10.1099/00221287-75-2-283. [DOI] [PubMed] [Google Scholar]
  4. Bak A. L., Black F. T., Christiansen C., Freundt E. A. Genome size of mycoplasmal DNA. Nature. 1969 Dec 20;224(5225):1209–1210. doi: 10.1038/2241209a0. [DOI] [PubMed] [Google Scholar]
  5. Bak A. L., Christiansen C., Stenderup A. Bacterial genome sizes determined by DNA renaturation studies. J Gen Microbiol. 1970 Dec;64(3):377–380. doi: 10.1099/00221287-64-3-377. [DOI] [PubMed] [Google Scholar]
  6. Bode H. R., Morowitz H. J. Size and structure of the Mycoplasma hominis H39 chromosome. J Mol Biol. 1967 Jan 28;23(2):191–199. doi: 10.1016/s0022-2836(67)80026-3. [DOI] [PubMed] [Google Scholar]
  7. Bové J. M., Saillard C., Junca P., DeGorce-Dumas J. R., Ricard B., Nhami A., Whitcomb R. F., Williamson D., Tully J. G. Guanine-plus-cytosine content, hybridization percentages, and EcoRI restriction enzyme profiles of spiroplasmal DNA. Rev Infect Dis. 1982 May-Jun;4 (Suppl):S129–S136. doi: 10.1093/clinids/4.supplement_1.s129. [DOI] [PubMed] [Google Scholar]
  8. Boxer L. M., Korn D. Structural and enzymological characterization of the homogeneous deoxyribonucleic acid polymerase from Mycoplasma orale. Biochemistry. 1979 Oct 16;18(21):4742–4749. [PubMed] [Google Scholar]
  9. Cerone-McLernon A. M., Furness G. The preparation of transforming DNA from Mycoplasma hominis strain Sprott tetr and quantitative studies of the factors affecting the genetic transformation of Mycoplasma salivarium strain S9 tets to tetracycline resistance. Can J Microbiol. 1980 Sep;26(9):1147–1152. doi: 10.1139/m80-189. [DOI] [PubMed] [Google Scholar]
  10. Chandler D. K., Razin S., Stephens E. B., Harasawa R., Barile M. F. Genomic and phenotypic analyses of Mycoplasma pneumoniae strains. Infect Immun. 1982 Nov;38(2):604–609. doi: 10.1128/iai.38.2.604-609.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
  11. Charron A., Castroviejo M., Bebear C., Latrille J., Bove J. M. A third DNA polymerase from Spiroplasma citri and two other spiroplasmas. J Bacteriol. 1982 Mar;149(3):1138–1141. doi: 10.1128/jb.149.3.1138-1141.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
  12. Darai G., Flügel R. M., Zöller L., Matz B., Kreig A., Gelderblom H., Delius H., Leach R. H. The plaque-forming factor for mink lung cells present in cytomegalovirus and herpes-zoster virus stocks identified as Mycoplasma hyorhinis. J Gen Virol. 1981 Jul;55(Pt 1):201–205. doi: 10.1099/0022-1317-55-1-201. [DOI] [PubMed] [Google Scholar]
  13. Darai G., Zöller L., Matz B., Delius H., Speck P. T., Flügel R. M. Analysis of Mycoplasma hyorhinis genome by use of restriction endonucleases and by electron microscopy. J Bacteriol. 1982 May;150(2):788–794. doi: 10.1128/jb.150.2.788-794.1982. [DOI] [PMC free article] [PubMed] [Google Scholar]
  14. DeLange R. J., Green G. R., Searcy D. G. A histone-like protein (HTa) from Thermoplasma acidophilum. I. Purification and properties. J Biol Chem. 1981 Jan 25;256(2):900–904. [PubMed] [Google Scholar]
  15. Furness G., Cerone A. M. Preparation of competent single-cell suspensions of Mycoplasma hominis tets and Mycoplasma salivarium tets for genetic transformation to tetracycline resistance by DNA extracted from Mycoplamsa hominis tetr. J Infect Dis. 1979 Apr;139(4):444–451. doi: 10.1093/infdis/139.4.444. [DOI] [PubMed] [Google Scholar]
  16. Glaser G., Razin A., Razin S. Stable RNA synthesis and its control in Mycoplasma capricolum. Nucleic Acids Res. 1981 Aug 11;9(15):3641–3646. doi: 10.1093/nar/9.15.3641. [DOI] [PMC free article] [PubMed] [Google Scholar]
  17. Grunstein M., Hogness D. S. Colony hybridization: a method for the isolation of cloned DNAs that contain a specific gene. Proc Natl Acad Sci U S A. 1975 Oct;72(10):3961–3965. doi: 10.1073/pnas.72.10.3961. [DOI] [PMC free article] [PubMed] [Google Scholar]
  18. Lee I. M., Davis R. E. DNA homology among diverse spiroplasma strains representing several serological groups. Can J Microbiol. 1980 Nov;26(11):1356–1363. doi: 10.1139/m80-224. [DOI] [PubMed] [Google Scholar]
  19. McGarrity G. J., Phillips D. M., Vaidya A. B. Mycoplasmal infection of lymphocyte cell cultures: infection with M. salivarium. In Vitro. 1980 Apr;16(4):346–356. doi: 10.1007/BF02618341. [DOI] [PubMed] [Google Scholar]
  20. Mills L. B., Stanbridge E. J., Sedwick W. D., Korn D. Purification and partial characterization of the principal deoxyribonucleic acid polymerase from Mycoplasmatales. J Bacteriol. 1977 Nov;132(2):641–649. doi: 10.1128/jb.132.2.641-649.1977. [DOI] [PMC free article] [PubMed] [Google Scholar]
  21. Mouches C., Taylor-Robinson D., Stipkovits L., Bove J. M. Comparison of human and animal Ureaplasmas by one- and two-dimensional protein analysis on polyacrylamide slab gel. Ann Microbiol (Paris) 1981 Sep-Oct;132B(2):171–196. [PubMed] [Google Scholar]
  22. Myers W. F., Baca O. G., Wisseman C. L., Jr Genome size of the rickettsia Coxiella burnetii. J Bacteriol. 1980 Oct;144(1):460–461. doi: 10.1128/jb.144.1.460-461.1980. [DOI] [PMC free article] [PubMed] [Google Scholar]
  23. Ranhand J. M., Mitchell W. O., Popkin T. J., Cole R. M. Covalently closed circular deoxyribonucleic acids in spiroplasmas. J Bacteriol. 1980 Sep;143(3):1194–1199. doi: 10.1128/jb.143.3.1194-1199.1980. [DOI] [PMC free article] [PubMed] [Google Scholar]
  24. Razin A., Razin S. Methylated bases in mycoplasmal DNA. Nucleic Acids Res. 1980 Mar 25;8(6):1383–1390. doi: 10.1093/nar/8.6.1383. [DOI] [PMC free article] [PubMed] [Google Scholar]
  25. Razin S. The mycoplasmas. Microbiol Rev. 1978 Jun;42(2):414–470. doi: 10.1128/mr.42.2.414-470.1978. [DOI] [PMC free article] [PubMed] [Google Scholar]
  26. Razin S., Tully J. G., Rose D. L., Barile M. F. DNA cleavage patterns as indicators of genotypic heterogeneity among strains of Acholeplasma and Mycoplasma species. J Gen Microbiol. 1983 Jun;129(6):1935–1944. doi: 10.1099/00221287-129-6-1935. [DOI] [PubMed] [Google Scholar]
  27. Robberson D. L., Gay M. L., Wilkins C. E., Hodnett J. L. A characterization of mitochondrial and mycoplasmal DNAs associated with cloned HeLa thymidine kinase minus cells. Cytogenet Cell Genet. 1980;26(2-4):127–141. doi: 10.1159/000131434. [DOI] [PubMed] [Google Scholar]
  28. Ryan J. L., Morowitz H. J. Partial purification of native rRNA and tRNA cistrons from mycoplasma sp. (Kid). Proc Natl Acad Sci U S A. 1969 Aug;63(4):1282–1289. doi: 10.1073/pnas.63.4.1282. [DOI] [PMC free article] [PubMed] [Google Scholar]
  29. Sarov I., Becker Y. Trachoma agent DNA. J Mol Biol. 1969 Jun 28;42(3):581–589. doi: 10.1016/0022-2836(69)90245-9. [DOI] [PubMed] [Google Scholar]
  30. Sawada M., Osawa S., Kobayashi H., Hori H., Muto A. The number of ribosomal RNA genes in Mycoplasma capricolum. Mol Gen Genet. 1981;182(3):502–504. doi: 10.1007/BF00293942. [DOI] [PubMed] [Google Scholar]
  31. Stephens E. B., Aulakh G. S., Rose D. L., Tully J. G., Barile M. F. Intraspecies genetic relatedness among strains of Acholeplasma laidlawii and of Acholeplasma axanthum by nucleic acid hybridization. J Gen Microbiol. 1983 Jun;129(6):1929–1934. doi: 10.1099/00221287-129-6-1929. [DOI] [PubMed] [Google Scholar]
  32. Teplitz M. Isolation of folded chromosomes from Mycoplasma hyorhinis. Nucleic Acids Res. 1977;4(5):1505–1512. doi: 10.1093/nar/4.5.1505. [DOI] [PMC free article] [PubMed] [Google Scholar]
  33. Tully J. G., Taylor-Robinson D., Cole R. M., Rose D. L. A newly discovered mycoplasma in the human urogenital tract. Lancet. 1981 Jun 13;1(8233):1288–1291. doi: 10.1016/s0140-6736(81)92461-2. [DOI] [PubMed] [Google Scholar]
  34. Woese C. R., Maniloff J., Zablen L. B. Phylogenetic analysis of the mycoplasmas. Proc Natl Acad Sci U S A. 1980 Jan;77(1):494–498. doi: 10.1073/pnas.77.1.494. [DOI] [PMC free article] [PubMed] [Google Scholar]

Articles from The Yale Journal of Biology and Medicine are provided here courtesy of Yale Journal of Biology and Medicine

RESOURCES