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. 2008 Oct 10;190(24):8033–8044. doi: 10.1128/JB.00705-08

TABLE 4.

Genes whose average mRNA ratios were altered by a factor of three or morea in acetate minimal medium for C. glutamicum WT compared with the ΔsugR mutant

Gene IDb Gene name, gene product, and/or deduced function mRNA ratio (ΔsugR mutant/WT)c
cg2925 ptsS, sucrose-specific enzyme II of the PTS 50.7
cg2119 pfkB, 1-phosphofructokinase protein 47.8
cg2120 ptsF, fructose-specific enzyme II of the PTS 32.3
cg2118 fruK, DeoR-type transcriptional regulator 26.9
cg2117 ptsI, enzyme I of the PTS 11.1
cg2121 ptsH, phosphocarrier protein HPr 9.0
cg3219 ldhA, NAD-dependent l-lactate dehydrogenase 6.7
cg0812 dtsR1, acetyl/propionyl-CoA carboxylase beta chain 6.6
cg0957 fas-IB, fatty acid synthase 5.9
cg2116 Putative phosphofructokinase 5.4
cg1290 metE, 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase 4.8
cg3218 pyk, pyruvate kinase 4.3
cg1763 sufD, components of an uncharacterized iron-regulated ABC-type transporter 3.6
cg1112 Septum formation initiator, secreted protein 3.6
cg0791 pyc, pyruvate carboxylase 3.5
cg0634 rplO, 50S ribosomal protein L15 3.5
cg2430 Hypothetical protein 3.5
cg1111 eno, enolase 3.3
cg3227 lldD, quinone-dependent l-lactate dehydrogenase 3.1
cg2419 pepB, leucyl aminopeptidase 3.1
cg1379 ssuB, aliphatic sulfonates ATP-binding ABC transporter protein 3.1
cg0604 rpsQ, 30S ribosomal protein S17 3.0
cg1977 Putative secreted protein 3.0
cg1537 ptsG, glucose-specific enzyme II of the PTS 3.0
cg1673 ppmN, polyprenol-phosphate-mannose synthase 0.3
cg2425 Predicted permease 0.3
cg3368 ABC transporter permease protein 0.2
cg2071 int2′, putative phage integrase (N-terminal fragment) 0.2
cg2115 sugR, transcriptional regulator of sugar metabolism 0.1
a

P < 0.05.

b

Gene numbering, gene designations, and descriptions of gene products are for NC006958.

c

The mRNA ratios represent average values obtained from three DNA microarray experiments performed with RNA isolated from three independent cultures in acetate minimal medium.