TABLE 1.

Microarray analysis of IFN-inducible genes whose expression differed between LNCaP and PC3 cells

Name	Affymetrix probe set	Mean signal intensity in mock-infected cells			Mean signal intensity in rwt-infected cells
		LNCaP	PC3a	PC3/LNCaP	LNCaP	PC3a	PC3/LNCaP
LMP7	209040_s_at	8b	859*	>106	1b	161*	>129
GBP1	202270_at	7b	681*	>97.7	1b	287*	>410
IFI16b	208966_x_at	17b	1,178*	>67.8	7b	146*	>22.0
MX1	202086_at	103b	5,658*	>54.8	94	520	5.5
IFIT1	203153_at	61b	3,218*	>52.8	2,487	1,442	0.6
GBP1	202269_x_at	34	1,419*	>42.3	3b	437*	>159
IFITM1	214022_s_at	103	4,057*	39.5	27	324*	11.9
IFI27	202411_at	43b	1,310*	>30.2	5b	233*	>45.7
IFI16	206332_s_at	24b	727*	>29.8	6b	104	>16.6
OAS1-E18	202869_at	57b	1,614*	>28.4	55	162	2.9
OAS1-E16	205552_s_at	35b	980*	>28.3	25b	147*	>5.9
OAS2	204972_at	45	1,261*	28.1	33	196	6.0
JAK1	201648_at	98	2,045*	20.9	34	1,121*	33.2
IFITM1	201601_x_at	232	4,684*	20.2	42	370*	8.8
IFIT5	203596_s_at	40b	676*	>16.7	428	171	0.4
IFI16	208965_s_at	23b	315*	>13.7	2b	81b
ISG20	204698_at	51b	693*	>13.7	62	123	2.0
IFI30	201422_at	92b	928*	>10.1	29b	680	>23.3
IRF9	203882_at	146b	1,347*	>9.2	25b	312*	>12.4
OAS3	218400_at	361	3,063*	8.5	248	671	2.7
ISG15	205483_s_at	1,914	16,139*	8.4	3,500	3,872	1.1
IFI6	204415_at	266	2,145*	8.1	177	631	3.6
IRF7	208436_s_at	341	2,301*	6.8	27	363*	13.5
STAT1	AFFX-HUMISGF3A/M97935_3_at	534	2,842*	5.3	78	499	6.4
IFITM3	212203_x_at	1,809	8,014*	4.4	558	3,556	6.4
IFIT5	203595_s_at	153b	545*	>3.6	200	171	0.9
IFI41	208012_x_at	389	1,310	3.4	51	202*	4.0
IFITM2	201315_x_at	1,637	5,180*	3.2	289	1,686	5.8
DAP4	209323_at	873	1,698*	1.9	34	975*	28.4
IRF3	202621_at	851	1,028	1.2	61	620*	10.2

^a*, P < 0.05 by a Students t test of LNCaP versus PC3 signal intensities.

^bSignal intensity not significantly different from background intensity of control probe set.