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. 2008 Dec;148(4):1760–1771. doi: 10.1104/pp.108.127910

Table I.

Summary of LTR-retrotransposon data from this study and from the indicated published dataa

nd, Not determined.

No. of Intact Elements with TSDs % Intact with TSDs % Solo LTRs with TSDs % Fragmented No. of Intact Elements Dated Insertion Date, Mya (Average) Ts:Tv (Ts+Tv):Indel
G. maxb 45 55 7 38 45 1.3 2.41 12.81
G. tomentellab 23 52 7 41 22 0.8 2.56 13.7
P. vulgarisb 7 nd nd nd 7 0.8 1.89 nd
Arabidopsiscd nd 30 35 35 87 1.9 nd nd
Ricece nd 24 35 41 260 1.3 nd nd
L. japonicusc nd 57 10 33 13 0.3 2.5 7.3
M. truncatulac nd 37 21 42 19 0.2 2.4 3.6
Maizec nd 61 9 30 47 0.7 3.9 8.2
Barleyc nd 35 17 48 17 1.3 1.6 12.0
T. monococcumc nd 50 10 40 30 1.0 1.9 8.7
a

Percentages are relative to total number of elements identified that contain at least a partial LTR sequence with homology to an intact LTR-retrotransposon. Remnants lacking any LTR homology were not included in the calculations used in this table. Ts, Transitions; Tv, transversions; TSD, target site duplication.

b

Summary data taken from Supplemental Tables S2 and S3.

c

Data taken from tables 1 and 4 of Vitte and Bennetzen (2006).

d

Data taken from table 1 of Devos et al. (2002).

e

Data taken from table 2 of Ma et al. (2004).