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. 2008 Nov 11;8:114. doi: 10.1186/1471-2229-8-114

Table 2.

Annotations of unigenes based on different public databases

Database No. of matched unigenes Percentage of total unigenes (%)
TIGR OGI(ver17) 7126 94.3
TIGR PseudoMolecule(ver5) 6151 81.4
NCBI UNIGENE(ver62) 6714 88.8
NCBI nr protein database 5831 77.2
93-11 BGI_Scan 5854 77.5
Uniprot protein database 3628 48.0
TIGR to GO 4565 60.4
KEGG Automatic Annotation Server 945 12.5

Alignments were performed by using blast (e-value = 1.00e-05), and 7,250 (95.9%) unigenes were annotated.