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. Author manuscript; available in PMC: 2009 Dec 15.
Published in final edited form as: Anal Biochem. 2008 Aug 26;383(2):226–235. doi: 10.1016/j.ab.2008.08.020

Table 1.

Nucleic acid sequences used in this study.

Sequence Name Sequence (beginning with N-term or 5′ end)
- PNA free and/or on nanoparticles TTTCCTTGGATGTGGT
- r18S Oligonucleotide (homologous to PNA sequence) TTTCCTTGGATGTGGT
- r18AS Oligonucleotide (complementary to PNA sequence) ACCACATCCAAGGAAA
- FM20 Oligonucleotide TTGCTTGGTAGACCAGGCTG
- FM2CAS Oligonucleotide CAGCCTGGTCTACCAAGCAA
- r18AS Molecular Beacon (homologous to r13AS, complementary to r18S and PNA) [MHEX]CCCCACCACATCCAAGGAAAGGGG[MDAB]
- MS5 Molecular Beacon (non-complementary beacon) [MHEX]CCCCGAGAGAGAGAGAGAGAGAGAGGGG[MDAB]
- sense strand of r18S clone TCGAGTTTCCTTGGATGTGGTG
- antisense strand of r18AS clone AATTCACCACATCCAAGGAAAC