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. Author manuscript; available in PMC: 2009 Sep 1.
Published in final edited form as: J Comput Chem. 2008 Sep;29(12):1970–1981. doi: 10.1002/jcc.20953

Figure 1.

Figure 1

Heavy atom model of tRNA (blue sticks) with crystallographic divalent metal ions (magnesium in green, manganese in orange) surrounded by oxygen atoms of coordinating water molecules (red dots). Labels correspond to ionic names presented in Table II. The most solvent exposed ions, which are not present in t6 and t6w systems, are designated by small letters.