. Author manuscript; available in PMC: 2008 Dec 10.

Published in final edited form as: Polymer (Guildf). 2005 May 26;46(12):4314–4321. doi: 10.1016/j.polymer.2005.02.040

Table 1.

Prediction accuracies under identity cut-off 90 in three cases

Matrix	id Cut-off	High id matches processing	id^1/3	id^1/2	id	id²	id³
BLOSUM45	0.90	Case 1 (all filtered)	0.675	0.680	0.697	0.725	0.735
		Case 2	0.677	0.683	0.701	0.730	0.740
		Case 3	0.678	0.683	0.702	0.731	0.742