Table 1.
Characteristics of examined SNPs
Gene | Chromosome | SNP | Location | RS# | MAF | D’ | D’ |
---|---|---|---|---|---|---|---|
IGF1 | 12q22-q23 | IVS2−16540 A>G | Intron | 2288378 | 0.75 | ||
Ex4+1830 C>T | 3’UTR | 6220 | 0.603 | 0.96 | |||
Ex4−177 G>C | 3’UTR | 5742714 | 0.137 | 0.97 | 0.94 | ||
IGF2 | 11p15.5 | IVS1+1280 A>G | Intron | 3213216 | 0.325 | ||
IVS2−69 C>T | Intron | 3213232 | 0.118 | −0.92 | |||
Ex4−233 C>T | 3’UTR | 2230949 | 0.051 | −0.97 | 0.98 |
SNP: single nucleotide polymorphism; RS#: SNP reference number; MAF: minor allele frequency, obtained from NCI SNP500 cancer database.