. 2008 Dec;180(4):2237–2250. doi: 10.1534/genetics.108.091439

TABLE 2.

Trait means, estimated heritability, and QTL significance thresholds for lesion and camalexin phenotypes

Trait	Isolate	Exp	Mean	SD	Bay	Sha	H²	LOD
LESION1	DN	A	0.159	0.102	0.172	0.169	0.65	2.38
LESION2	DN	A	0.535	0.216	0.581	0.514	0.61	2.25
LESION3	DN	A	0.582	0.219	0.608	0.592	0.64	2.50
CAMALEXIN	DN	A	176.0	236.4	205.9	214.5	0.56	2.29
LESION1	FRESA	A	0.170	0.110	0.193	0.154	0.60	2.43
LESION2	FRESA	A	0.628	0.246	0.625	0.607	0.57	2.33
LESION3	FRESA	A	0.691	0.379	0.699	0.647	0.54	2.04
CAMALEXIN	FRESA	A	131.1	115.5	142.2	114.4	0.64	2.37
LESION1	GRAPE	A	0.122	0.085	0.107	0.130	0.57	2.20
LESION2	GRAPE	A	0.459	0.200	0.416	0.388	0.57	2.32
LESION3	GRAPE	A	0.515	0.233	0.454	0.412	0.57	2.30
CAMALEXIN	GRAPE	A	194.0	176.3	194.8	273.0	0.60	2.28
LESION-i	83-2	B	0.129	0.082	0.140	0.115	0.61	2.31
LESION1	83-2	B	0.278	0.151	0.270	0.244	0.67	2.29
LESION2	83-2	B	0.603	0.202	0.588	0.602	0.73	2.16
LESION3	83-2	B	0.691	0.213	0.695	0.665	0.75	2.47
CAMALEXIN	83-2	B	212.4	153.2	194.9	199.7	0.72	2.33
LESION-i	FRESA	B	0.225	0.130	0.296	0.220	0.65	2.35
LESION1	FRESA	B	0.453	0.155	0.469	0.445	0.60	2.48
LESION2	FRESA	B	0.795	0.170	0.782	0.743	0.61	2.25
LESION3	FRESA	B	0.942	0.177	0.941	0.877	0.63	2.26
CAMALEXIN	FRESA	B	114.5	99.3	92.5	92.0	0.74	2.29
LESION-i	GRAPE	B	0.171	0.123	0.160	0.147	0.58	2.37
LESION1	GRAPE	B	0.358	0.164	0.366	0.311	0.58	2.24
LESION2	GRAPE	B	0.739	0.174	0.744	0.733	0.58	2.33
LESION3	GRAPE	B	0.861	0.181	0.855	0.821	0.56	2.45
CAMALEXIN	GRAPE	B	83.1	84.4	61.9	70.6	0.69	2.30
CAMALEXIN	CONTROL	B	24.7	84.8	28.8	0.8	0.67	2.26

Exp, differentiates experiment A from experiment B. Overall trait mean and standard deviation (SD) are provided for all trait-by-isolate combinations within each experiment. Bay and Sha indicate trait mean values for parental accessions interplanted with RILs. H² is the broad-sense heritability estimate for each trait, estimated as the proportion of phenotypic variance explained by genotype in a one-way ANOVA model. LOD represents the significance threshold for QTL (P = 0.05) obtained by permutation tests.