Table 2.
Hairpins |
Tm (°C) |
||
---|---|---|---|
Complexed with TAR | Complexed with TARC5 | RNA alone | |
R06 | 31.3 ± 0.3 | 24.4 ± 0.4 | 71.5 ± 0.6 |
R06G5*a | 20.5 ± 0.3 (−10.8°C) | 22.0 ± 0.2 | 69.5 ± 0.6 |
R06C8* | 33.2 ± 0.6 (+1.9°C) | 25.5 ± 0.2 | 71.3 ± 1.5 |
R06A12* | 30.3 ± 0.5 (−1.0°C) | 23.9 ± 0.2 | 71.2 ± 1.3 |
TAR | – | – | 85.3 ± 0.3 |
TARC5 | – | – | 83.4 ± 0.5 |
aSubscripts refer to 2′-O-methyl residues at the indicated positions. The experiments were performed at 1 µM of each RNA, in a 10 mM sodium phosphate buffer, pH 7.2 at 20°C, containing 140 mM potassium chloride, 20 mM sodium chloride and 0.3 mM magnesium chloride.