Skip to main content
. 2008 Oct 20;9:445. doi: 10.1186/1471-2105-9-445

Table 3.

Localisation accuracies for the fixed set of protein locations.

I II


feature set reduction method #features ACC¯ ACC ACC¯ ACC
A - 73 0.777 0.799 0.790 0.828
- 73 0.818 0.833 0.806 0.835
A SDA 17 0.860 0.873 0.873 0.887
SDA 15 0.878 0.891 0.883 0.892

Although the SFAMs were trained using both manually and automatically obtained protein distribution patterns, the evaluation is performed separately. Here, I denotes the accuracies regarding the manually acquired patterns and II the results with respect to the automatically generated samples. The results indicate an advantage of feature set ℬ in comparison to feature set A. Moreover, the feature reduction leads to a significant improvement of the protein localisation, independent from the feature set applied.