Table 1.
Intramolecular distances for 17 membrane-bound doubly-labeled derivatives from four-pulse DEER experiments
Derivative | Distance, Å |
||
---|---|---|---|
DEER | Ideal helix | SDS (NMR) | |
11R1/26R1 | 25 | 22.5 | 22.5 |
11R1/41R1 | 48 | 45 | 43.3 |
22R1/52R1 | 49 | 45 | 23.3 |
26R1/41R1 | 23 | 22.5 | 25.4 |
26R1/56R1 | 44 | 45 | 24.4 |
37R1/67R1 | 42 | 45 | 39.2 |
41R1/56R1 | 23 | 22.5 | 24.0 |
41R1/67R1 | 37 | 39 | 38.8 |
41R1/70R1 | 41 | 43.5 | 42.0 |
44R1/67R1 | 36 | 34.5 | 34.2 |
48R1/67R1 | 29 | 28.5 | 27.8 |
56R1/70R1 | 22 | 21 | 20.1 |
56R1/85R1 | 42 | 43.5 | 42.0 |
63R1/81R1 | 26 | 27 | 25.7 |
11R1/70R1 | >60 | 88.5 | 22.7 |
11R1/81R1 | >60 | 105 | 22.8 |
41R1/85R1 | >60 | 66 | 62.6 |
The experimental distances are taken from the peaks of the Tikhonov regularization-based fits (for data, see Fig. S3), but identical maximal distances (within 1 Å or less) were obtained from Gaussian fits. The data are compared to the rise of an ideal helical structure, which is taken to be 1.5 Å per residue. The final column shows the respective α -carbon distances from the high-resolution NMR structure of SDS-bound α -synuclein.