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. 2008 Dec 30;3(12):e4053. doi: 10.1371/journal.pone.0004053

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Feng et al.

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.

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Top: View to show gene annotation. Below: Zoom-out view to include two 100 kb segments to show the alignment of 3 genomes. At top of each alignment is annotation of M66-2, and below 3 bands indicating how M66-2, N16961 and O395 differ from the other genomes. Map positions in kb given below each genome. Large indels shown as blocks of colour (green shows deletion, red shows insertion) named as in Table S5, and gene names or locus tags are also shown for the indels not in M66-2. SNPs of various classes indicated as shown in the key, and clusters of SNPs proposed to have entered the lineage by recombination indicated by orange bars as shown in the key. Full genome alignments are shown in Figure S1.