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. 2008 Oct 3;74(24):7675–7683. doi: 10.1128/AEM.01229-08

TABLE 2.

Oligonucleotides used as primers

Primer name Primer sequence Location (bp) Use
C427 5′-CTACATTACGCATTTGGA-3′ 533-516a iPCR
Tn917F 5′-TGGTCTTAAGGCAGCCAGAG-3′ 2180-2199a iPCR
Tn4431 5′-CCATCAAGGGTATGAGTA-3′ 4537-4520a iPCR
Tn5054 5′-AAATAGATCCCGAAGTAAC-3′ 5143-5161a iPCR
Tn4292 5′-TTGAGCACGAGTCAGAGC-3′ 4292-4275a Southern blot probe
Tn3768 5′-AACAATATTCGATCAGGAGA-3′ 3767-3786a Southern blot probe
InsL 5′-AGCCATCAAAGAAAGGAAGA-3′ 1794567-1794586b Amplification of insertion site
InsR 5′-GTATCGGTGAAAGGCAACAG-3′ 1795615-1795596b Amplification of insertion site
LM DBR-F 5′-CGCTCAAACCAATTTCTGCTA-3′ 1794114-1794134b RT-PCR
LM DBR-R 5′-CTTCCTTTCTTTGATGGCTTT-3′ 1794585-1794565b RT-PCR
16S rRNA-F 5′-TTAGTGGCGGACGGGTGAGT-3′ rrsA-rrsB RT-PCR
16S rRNA-R 5′-CGGACAACGCTTGCCACCTA-3′ rrsA-rrsB RT-PCR
P1 5′-GTCCGCCTTAATAGAGCA-3′ 1794392-1794409b Identification of revertant
P2 5′-GTTCTACCGCTGGCTCTT-3′ 1797225-1797208b Identification of revertant
C1 5′-GGGCGTCTCAGCTCTAAAATCCG-3′ 4385-4406a Identification of allelic exchange
C2 5′-TAGGAACTATGAAAAAGGAACGGA-3′ 1729-1706a Identification of allelic exchange
M13fwd 5′-GGTTTTCCCAGTCACGAC-3′ Identification of allelic exchange
M13rev 5′-AGCGGATAACAATTTCACAC-3′ Identification of allelic exchange
a

Location in the published nucleotide sequence of Tn917 (accession number M11180).

b

Location in the published complete genome of L. monocytogenes strain 4b F2365 (accession number AE017262).