TABLE 2.
NRRLa | Equivalent | Serotypeb | MLGTc | AscI pattern | ApaI pattern | MVLSTd | MLSTe |
---|---|---|---|---|---|---|---|
33555 | J0221 | 1/2a | Lm2.46 | GX6A16.0170 | GX6A12.0316 | 2 | 2 |
33556 | J0809 | 1/2a | Lm2.50 | GX6A16.0401 | GX6A12.0519 | 1 | 1 |
33557 | J0834 | 1/2a | Lm2.11 | GX6A16.0018 | GX6A12.0022 | 5 | 5 |
33558 | J0846 | 1/2a | Lm2.11 | GX6A16.0034 | GX6A12.0022 | 5 | 5 |
33559 | J0847 | 1/2a | Lm2.46 | GX6A16.0233 | GX6A12.0467 | 2 | 2 |
33560 | J1038 | 1/2a | Lm2.9 | GX6A16.0010 | GX6A12.0005 | 3 | 3 |
33561 | J1108 | 1/2a | Lm2.28 | GX6A16.0458 | GX6A12.0559 | 5 | 5 |
33562 | J1219 | 1/2a | Lm2.11 | GX6A16.0018 | GX6A12.0022 | 5 | 5 |
33563 | J1769 | 1/2a | Lm2.44 | GX6A16.0055 | GX6A12.0708 | 4 | 4 |
33564 | J2061 | 1/2a | Lm2.11 | GX6A16.0018 | GX6A12.0022 | 5 | 5 |
33565 | J2342 | 1/2a | Lm2.51 | GX6A16.0675 | GX6A12.0716 | 6 | 6 |
33566 | J2692 | 1/2a | Lm2.12 | GX6A16.0083 | GX6A26.0598 | 10 | 11 |
33567 | J2980 | 1/2a | Lm2.52 | GX6A16.0347 | GX6A12.0031 | 7 | 7 |
33568 | J3560 | 1/2a | Lm2.15 | GX6A16.0849 | GX6A12.0451 | 8 | 8 |
33575 | J1109 | 1/2c | Lm2.10 | GX6A16.0057 | GX6A12.0085 | 9 | 10 |
33576 | J1131 | 1/2c | Lm2.10 | GX6A16.0279 | GX6A12.0356 | 9 | 9 |
33577 | J2252 | 1/2c | Lm2.10 | GX6A16.0082 | GX6A12.0705 | 9 | 10 |
33578 | J2283 | 1/2c | Lm2.24 | GX6A16.0057 | GX6A12.0085 | 9 | 10 |
33579 | J2315 | 1/2c | Lm2.10 | GX6A16.0082 | GX6A12.0679 | 9 | 10 |
33580 | J0845 | 3a | Lm2.12 | GX6A16.0609 | GX6A12.0797 | 10 | 11 |
Isolates are identified with NRRL-B numbers from the U.S. Department of AgricultureARS Culture Collection, Peoria, IL. Additional strain history information is available from the ARS Culture Collection website (http://nrrl.ncaur.usda.gov/cgi-bin/usda).
Serotype data were provided by Lewis Graves (CDC).
Lm2.50 to 2.52 were not observed in the original set of sequenced isolates (Table 1).
Multi-virulence locus sequence typing was performed as described by Zhang et al. (50).
Multilocus sequence typing was performed as described by Revazishvili et al. (37).