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. 2007 Jul 11;5(20):273–283. doi: 10.1098/rsif.2007.1137

Table 1.

Amino acids composition within the four simulated zones and the corresponding α-helices, together with the Kyte–Doolittle and Rose indexes.

zones domain α-helix AA range AA numbera KD indexb Rose index
1 E16–H105 90 29.1 66.14
IA h2 E16–L31 16 11.9 12.66
h3 P35–D56 22 −2.7 16.04
h4 S65–T76 12 3.5 9.04
h5 A88–A92 5 5.1 3.92
h6 E95–H105 11 −17.7 7.81
2 E208–E280 73 −29.5 52.59
IIA h2 E208–F223 16 −5.3 11.62
h3 E227–H247 21 −1.3 15.56
h4 L250–E266 17 −0.9 12.49
h5 L275–E280 6 −2.1 4.43
3 W341–V415 75 −18.2 54.30
IIB h3 S342–A362 21 12.5 15.71
h4 D365–E383 19 −14.4 13.56
IIIA h1 P384–L398 15 −8.8 10.74
h2 Y401–V415 15 −5.9 10.71
4 A510–A582 73 −31.6 50.52
IIIB h1 A510–T515 6 6.4 4.59
h2 E518–K536 19 −23.1 12.86
h3 E542–K560 19 0.9 13.88
h4 E565–A582 18 −1.4 12.80
a

The number of amino acids in the subdomains exceeds the sum of those in the α-helices owing to the presence of regular turns and random strands.

b

Kyte–Doolittle index, calculated as the sum of the values for the individual amino acids. A positive hydropathy value indicates hydrophobicity and a negative one hydrophilicity.