Table 1.
The posterior probabilities of the 10 fixed amino acid models for each of the eight alignments. (A, Drosophila adh; B, vertebrate β-globin; C, Leviviridae coat; D, Japanese encephalitis env; E, flavivirus; F, influenza; G, HIV pol; H, Leviviridae replicase.)
| model | A | B | C | D | E | F | G | H |
|---|---|---|---|---|---|---|---|---|
| M1 | 6.20×10−101 | 3.69×10−119 | 1.33×10−66 | 1.52×10−72 | 1.56×10−151 | 9.01×10−55 | 5.35×10−254 | 2.54×10−95 |
| M2 | 6.20×10−3 | 1.04×10−10 | 1.41×10−8 | 9.99×10−1 | 9.99×10−1 | 9.99×10−1 | 9.99×10−1 | 1.69×10−10 |
| M3 | 2.81×10−11 | 9.99×10−1 | 1.39×10−8 | 2.11×10−15 | 1.71×10−18 | 1.27×10−14 | 4.12×10−45 | 1.09×10−26 |
| M4 | 5.55×10−34 | 2.59×10−53 | 1.52×10−60 | 3.40×10−33 | 2.47×10−87 | 3.16×10−33 | 3.04×10−131 | 3.95×10−91 |
| M5 | 5.46×10−44 | 8.65×10−78 | 7.53×10−89 | 3.72×10−32 | 1.92×10−113 | 5.07×10−37 | 2.56×10−143 | 6.65×10−121 |
| M6 | 9.88×10−1 | 5.04×10−6 | 9.99×10−1 | 4.10×10−8 | 7.81×10−6 | 1.54×10−8 | 7.22×10−31 | 2.27×10−2 |
| M7 | 4.53×10−3 | 1.04×10−13 | 4.14×10−9 | 2.68×10−32 | 3.21×10−20 | 4.11×10−24 | 1.99×10−12 | 6.91×10−10 |
| M8 | 6.67×10−4 | 5.65×10−19 | 1.97×10−9 | 2.99×10−10 | 5.26×10−7 | 1.20×10−8 | 6.49×10−17 | 5.68×10−10 |
| M9 | 2.24×10−7 | 1.77×10−27 | 5.14×10−5 | 1.34×10−15 | 9.83×10−17 | 2.96×10−17 | 1.31×10−44 | 4.28×10−18 |
| M10 | 1.51×10−10 | 8.13×10−24 | 4.43×10−5 | 6.40×10−23 | 2.21×10−20 | 4.00×10−22 | 3.12×10−67 | 9.77×10−1 |