Table 2.
Primers used in this study.
| Primer name | Sequences (5′-3′) |
|---|---|
| 1698-1F | AGGATAAACTCGAGCAAACAGCTCATCCGTCGAG |
| 1698-1R | AGTTAGTCTAGAGGGCAGTATATGTTAGATAAAATG |
| 1698-2F | AGTTAGTCTAGACCCTTTCGAACACTCCAGAAT |
| 1698-2R | AGTTAGAGATCTGTAGAAAATGGATGTGTCAGG |
| 1698-up | TTTTCTCCGGCAATAAAAGGCC |
| 1698-down | TTTTGAAAGTCACCGACGGAC |
| 1698-His-up | AGGATAGAATTCTAAGGAGGTAGGATAATAATGCGGAGAAGAACACAAATG |
| 1698-His-down | AGTTAGTCTAGATTAATGGTGATGGTGATGGTGAATCTGGCTGAGATGGTTACAAG |
| 1699-1F | AGGATAAACTCGAGTCGTTATAAACCACGTCACATGC |
| 1699-1R | AGTTAGTCTAGAAATGACTTATGACTAAAATTTTC |
| 1699-2F | AGTTAGTCTAGATTTCTACCCTTCATAATTTTTAATTTC |
| 1699-2R | AGTTAGAGATCTTGTTATTGACTGGATGCGCTC |
| 1699-up | TTCATTTGTGTTCTTCTCCGC |
| 1699-down | CTTTGCTTCTTTAATTGAAATTG |
| 1699-His-up | AGGATAGGATCCTAAGGAGGTAGGATAATAATGGATGTGTCAGGCCAACT |
| 1699-His-down | AGTTAGTCTAGATTAATGGTGATGGTGATGGTGATTCGCGATGGCGACTTG |
| lacZ-exsA-FW | AGGATATCTAGAGTGATTTATGATTATATCCTACGC |
| lacZ-exsA-RE | AGTTAGAGATCTTTTCTACCCTTCATAATTTTTAAT |
| lacZ-1668-FW | AGGATATCTAGAAATACTCAT TCACTTGCACTC |
| lacZ-1668-RE | AGTTAGAGATCTAATGTAAAAAATATGCGCAATG |
| Promoter1668-FW | AATACTCATTCACTTGCACTC |
| Promoter1668-RE | AATGTAAAAAATATGCGCAATG |
| Promoter1687-FW | CAGAGTAGGGCATCACCG |
| Promoter1687-RE | TTGAATGAATAATCCTATAGTG |
| 1668FW_motif | CGGACCGATGCATCAAAC |
| 1668RE_motif1 | ATTGATGCTGGGAGAATAG |
| 1668RE_motif2 | GGATGAGGTGGTATTTATAG |
| 1668RE_motif3 | TATTGGTCGGGAGTTTTTAG |
| 1668RE_motif4 | AAACGCCCTAAAAAAACACG |
| 1668RE_motif5 | GTCTGATTTTGACAGCCTG |
| 1668RE_motif6 | CAGCCTGATAAAAACGCAC |
| 1668RE_motif7 | TCATATAATTCGCTTGTATTG |
| 1668RE_motif8 | ACGAAAGGAGTGCAAGTGA |
| 1668FW_motif9 | CAGGCTGTCAAAATCAGACG |
| 1668RE_motif10 | GGACGCCGGGGGAAAACACGTCTGATTTTGAC |
| EMSA1687motif_FW | AAACAACTCAGTGAGCGG |
| EMSA1687motif1_RE | GTCATGAAAACAGAGTGACC |
| EMSA1687motif2_RE | AGAGCCGTTTTGATGCTG |
| EMSA1687motif3_RE | TATTTTTCATCATTCGGCGC |
| EMSA1687motif4_RE | TAATATGCTAAAGATGGTCGG |
| EMSA1687motif5_RE | CGTTTTAAGACGTTTGAAAAC |
| EMSA1687motif6_RE | TGGTATGGGGGGGATGGTCGGATTTTTTTCG |
| 1656insertion_FW | AGGATAAACTCGAGATTAGATGGGCCGAAAGCTC |
| 1656insertion_RE | AGTTAGAGATCTCGAATGTGCACGTTTTACTTG |
| vp1656-up | AGGATAGAATTCAGGAGATATACCATGTTGGATAAAATTGGTGGAAC |
| vp1656-down | AGTTAGTCTAGATTAATGGTGATGGTGATGGTGCACTGTCGGGATAGATGCGC |
| 1662–600-up | GTCACGCAAAAAGGCATGAGC |
| 1662–600-down | AAAACGCAGGTGAATTCCCGG |
| 1668–600-up | CAAGAGCCAAGTGCTTGGTATC |
| 1668–600-down | CATGTCGTCACCTTCGACCA |
| 1670–600-up | AGAGCGCTCTCTTGCGTCAC, |
| 1670–600-down | TTTGGGATGTTCATCATTCGGG |
| 1686–600-up | ATTCTAAATGAAGGCAAACTCAGC |
| 1686–600-down | GTTTAAATCCGTACTTGCGAGC |
| 1687–600-up | ATGGCTAATGGATTTATTACCG |
| 1687–600-down | TTACACCCTTAATGTAGAGAATTG |
| 1695–600-up | GGATGTCAGGACGTAACCATC |
| 1695–600-down | CCGTCAGCAGCAACGTGC |
| 1696–600-up | ATGTGGTACTTCGATGGCG |
| 1696–600-down | TTGTGGCTGATCGAGTTGAG |
| 1698-600-up | GTTGTCCACGTGAATCACCGA |
| 1698-600-down | GTAGTCCGCCAGTTCTTTCAA |
| 1699-600-up | GTCGTTCACAATGGTCAATTACG |
| 1699-600-down | CGTCAGCAAAAGCTTGTGTG |
| secY1 | AGGATAAACTCGAGTGGTGCTCTGGAGCGTGCATC |
| secY2 | AGTTAGTCTAGACCTTGTTGACGCTTCGCGTAG |