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. 2008 Nov 7;75(1):193–202. doi: 10.1128/AEM.01792-08

TABLE 2.

Statistical analyses of frequency differences of various genetic and phenotypic traits of V. fischeri isolates collected from different host populations on Oahu in 2005

Test and trait χ2 t df U % of cells <5b P valuea Fisher's exact test P valuea
Chi-square test
    VfRep type 20.4 2 17 **** (****) **** (****)
    Bioluminescence level 5.5 1 0 *** (***) *** (***)
    Colony pigmentation 6.7 1 0 **** (***) *** (***)
Mann-Whitney-Wilcoxon test
    Motility rate 776 **** (****)
    Siderophore production 451 * (*)
Welch t test, growth rate 2.46 50.75 *** (***)
a

The correction of P values for multiple testings was performed by considering each test as a family of tests. The P values were analyzed and adjusted according to the method of Hommel (31); corrected values are in parentheses. Ranges of calculated P values: *, P > 0.1; **, 0.1 > P > 0.05; ***, 0.01 < P < 0.05; ****, P < 0.01.

b

The percentage of cells <5 refers to a common benchmark for the validity of χ2 analysis.