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Predicted 5′-end stem-loop structures of flaviviruses. The optimal MFOLD-predicted RNA secondary-structure models for mosquito-borne and tick-borne flaviviruses and a flavivirus with no known vector are shown. Results are shown for WNV M12294, yellow fever virus (YFV) NC-002031, tick-borne encephalitis virus (TBEV) U27495, and Modoc virus (MODV) AJ242984.
