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Nucleotide sequences of primers
| Amplicon | Primer sequence 5′→3′
|
Reference or source | |
|---|---|---|---|
| Forward | Reverse | ||
| LTR | TGACACAGCAAATGTAACCGCAAG | CCACGTTGGGCGCCAGCTGCGAGA | 22 |
| LTR-Gag | TGACACAGCAAATGTAACCGCAAG | CTTGCCTGATCCATATTTGCCTGTG | This study |
| Gag | TGGTGARKCTAGMTAGAGACATGG | CATAGGRGGHGCGGACGGCASCA | 5 |
| Gag-Pol | AAAACCCGGCCACTTAGCAAG | CTATCCAGAGAACCTGTCCTG | This study |
| Pol | GGTGCCTGGACATAAAGGGATTC | GCCACTCTCCTGRATGTCCTCT | 18 |
| Pol-LTR | CCTAGGGACAAGTCCTATGG | GCCACCTGCGAGGACCGCACC | This study |
