Table 1.
Clone IDs (Accession #) | BLAST results | Score (Bits) | E value | M * | t * | P-value* | Adjusted P-value* |
PpMBP1 (EF120990) | AAX55747 mannose-binding protein Pacifastacus leniusculus | 110 | 6e-23 | 5 4.666 4.627 4.571 4.2 4.126 3.888 |
9.536 8.122 9.365 7.937 8.445 8.573 8.984 |
0 0 0 0 0 0 0 |
0.006 0.01 0.007 0.011 0.009 0.008 0.007 |
PpMBP2 (EF120991) |
AAX55747 mannose-binding protein P. leniusculus | 104 | 8e-21 | 3.865 | 5.7 | 0.002 | 0.032 |
PpCTLR (EF120992) |
AAP58737 C-type lectin receptor Paralabidochromis chilotes | 46.6 | 8e-04 | 2.015 1.845 |
5.564 5.722 |
0.002 0.002 |
0.035 0.032 |
M = log2 fold change in expression, t = t-statistic, and the P value = t-distribution. The adjusted P values were calculated using the False Discovery Rate (FDR) procedure. Positive values of M and t indicate up-regulation in the Cy3 sample (* multiple values represent several cDNAs all forming one contig).