Table 3.
GIs located next to tRNA genes in five B. pseudomallei strains.
| GIs | GIs located next to tRNA genes | tRNA-SSR | |||||
| K96243 | 1710b | 1106a | MSHR668 | MSHR305 | |||
| Chromosome 1 | GI1a | X | |||||
| GI2 | X | tRNA-Phe | |||||
| GI4 | X | tRNA-Met | |||||
| GI4.1 | X | tRNA-Met | |||||
| GI4.2 | X | tRNA-Met | |||||
| GI4.3 | X | ||||||
| GI4.4 | X | tRNA-Met | |||||
| GI5 | X | tRNA-Leu | |||||
| GI5a | X | ||||||
| GI5a.1 | X | X | |||||
| GI5a.2 | X | ||||||
| GI6b | X | tRNA-Pro | |||||
| GI7 | X | ||||||
| GI7.1 | X | tRNA-Arg | |||||
| GI7.2 | X | ||||||
| GI7.3 | X | tRNA-Arg | |||||
| GI7.4 | X | ||||||
| GI8d | X | tRNA-Cys | |||||
| GI9 | X | tRNA-Ser | |||||
| GI9a | X | ||||||
| GI9b | X | tRNA-Gly | |||||
| GI9c | X | tRNA-Pro | |||||
| GI9c.1 | X | tRNA-Pro | |||||
| GI10 | X | X | tRNA-Thr | ||||
| GI10.1 | X | ||||||
| GI10.2 | X | tRNA-Thr | |||||
| GI10.3 | X | tRNA-Thr | |||||
| GI11 | X | tRNA-Ala | |||||
| GI11.1 | X | ||||||
| GI11.2 | X | tRNA-Ala | |||||
| GI12 | X | tRNA-Arg | |||||
| GI12.1 | X | ||||||
| GI12.2 | X | ||||||
| GI12.3 | X | tRNA-Arg | |||||
| GI12.4 | X | ||||||
| Chromosome 2 | GI13 | X | tRNA-Ser | ||||
| GI13.1 | X | ||||||
| GI13.2 | X | ||||||
| GI13.3 | X | ||||||
| GI13.4 | X | ||||||
| GI15d | X | ||||||
Note: The specific tRNA genes that facilitate tRNA-site specific recombination (tRNA-SSR) at some of these genomic locations are listed. In many cases tRNA-SSR (bold) has facilitated the insertion of multiple, distinct GIs in different strains at the same genomic location.