Skip to main content
. 2009 Jan 9;4(1):e4164. doi: 10.1371/journal.pone.0004164

Table 2. Amino acids in each pocket being critical for peptide-HLA groove interaction according to their electrostatic behavior.

Effect P1 P4 P7 P9
Anchoring Primary α55E α24F - -
β81H
Secondary α9Q α71E
α43W β13R * β28D α76R
β83Y β26F β61W β9W
β78Y
Recognition Fine - β13R β28D -
β26F
Coarse α24F α9Q α72I
α32F β74A β47F α76R
α43W β78Y β61W β57D
β85V
*

Polymorphic positions are shown in bold-types.