Table 1. Interferon gene expression changes following NTHi lysate treatment.
| Symbol | Definition | 2 h fold change | 4 h fold change | Accession |
| G1p2 | Interferon alpha-inducible protein | 4.51 | 8.00 | NM_015783.1 |
| Icsbp1 | Interferon consensus sequence binding protein 1 | 1.20 | 1.07 | NM_008320.2 |
| Ifi1 | Interferon inducible protein 1 | 3.68 | 2.38 | NM_008326.1 |
| Ifi16 | Interferon gamma-inducible protein 16 | 1.22 | 2.24 | NM_008329.1 |
| Ifi202b | Interferon activated gene 202B | 2.48 | ND | NM_008327.1 |
| Ifi203 | Interferon activated gene 203 | 1.44 | 2.40 | NM_008328.1 |
| Ifi205 | Interferon activated gene 205 | 24.22 | 53.00 | NM_172648.2 |
| Ifi30 | Interferon gamma inducible protein 30 | 1.044 | 0.72 | NM_023065.2 |
| Ifi35 | Interferon-induced protein 35 | 1.20 | 1.34 | NM_027320.1 |
| Ifi47 | Interferon gamma inducible protein | 4.66 | 3.60 | NM_008330.1 |
| Ifit1 | Interferon-induced protein with tetratricopeptide repeats 1 | ND | ND | NM_008331 |
| Ifit2 | Interferon-induced protein with tetratricopeptide repeats 2 | 2.01 | 4.23 | NM_008332.2 |
| Ifit3 | Interferon-induced protein with tetratricopeptide repeats 3 | 3.08 | 4.21 | NM_010501.1 |
| Ifitm1 | Interferon-induced transmembrane protein 1 | 2.66 | 2.59 | NM_026820.2 |
| Ifitm2 | Interferon-induced transmembrane protein 2 | 1.75 | 1.36 | NM_030694 |
| Ifitm3 | Interferon-induced transmembrane protein 3 | 1.70 | 1.34 | NM_025378.1 |
| Ifitm5 | Interferon-induced induced transmembrane protein 5 | 1.53 | 2.40 | NM_053088 |
| Ifitm7 | Interferon-induced transmembrane protein 7 | 0.70 | 0.72 | NM_028968 |
| Ifna1 | Interferon alpha family gene 1 | 1.74 | 1.69 | NM_010502.1 |
| Ifna2 | Interferon alpha family gene 2 | ND | ND | NM_010503.1 |
| Ifna4 | Interferon alpha family gene 4 | ND | ND | NM_010504.1 |
| Ifna5 | Interferon alpha family gene 5 | 0.93 | 0.81 | NM_010505 |
| Ifna6 | Interferon alpha family gene 6 | ND | 9.08 | NM_008335.1 |
| Ifna7 | Interferon alpha family gene 7 | 1.50 | 0.55 | NM_008334 |
| Ifna9 | Interferon alpha family gene 9 | ND | ND | NM_010507.1 |
| Ifna11 | Interferon alpha family gene 11 | 1.05 | 0.94 | NM_008333 |
| Ifna12 | Interferon alpha family gene 12 | ND | ND | NM_177361.2 |
| Ifna13 | Interferon alpha family gene 13 | ND | ND | NM_177347.2 |
| Ifnar1 | Interferon (alpha and beta) receptor 1 | 1.87 | 4.84 | NM_010508.1 |
| Ifnar2 | Interferon (alpha and beta) receptor 2 | 2.63 | 1.87 | NM_010509.1 |
| Ifng | Interferon gamma | ND | 8.63 | NM_008337.1 |
| Ifngr1 | Interferon gamma receptor 1 | 1.03 | 0.69 | NM_010511.1 |
| Ifngr2 | Interferon gamma receptor 2 | 4.67 | 2.96 | NM_008338.2 |
| Ifrd1 | Interferon-related developmental regulator 1 | 7.09 | 11.35 | NM_013562 |
| Ifrd2 | Interferon-related developmental regulator 2 | 0.85 | 1.05 | NM_025903.1 |
| Ifrg15 | Interferon alpha responsive gene | 1.158 | 1.34 | NM_022329.2 |
| Igtp | Interferon gamma induced GTPase | 1.92 | 2.57 | NM_018738.2 |
| Irebf1 | Interferon response element binding factor 1 | ND | 9.45 | NM_013714.1 |
| Irf1 | Interferon regulatory factor 1 | 5.43 | 1.96 | NM_008390.1 |
| Irf2 | Interferon regulatory factor 2 | 1.01 | 0.93 | NM_008391.2 |
| Irf2bp1 | Interferon regulatory factor 2 binding protein 1 | 0.68 | 0.82 | NM_178757.3 |
| Irf3 | Interferon regulatory factor 3 | 1.24 | 0.93 | NM_016849.2 |
| Irf4 | Interferon regulatory factor 4 | 2.63 | 1.73 | NM_013674.1 |
| Irf5 | Interferon regulatory factor 5 | 1.81 | 1.57 | NM_012057.1 |
| Irf6 | Interferon regulatory factor 6 | 1.11 | 1.02 | NM_016851.1 |
| Irf7 | Interferon regulatory factor 7 | 1.60 | 3.18 | NM_016850.1 |
| Isg20 | Interferon-stimulated protein | 1.90 | 1.69 | NM_020583.4 |
| Isgf3g | Interferon dependent positive acting transcription factor 3 gamma. | 2.27 | 1.24 | NM_008394.2 |
| Jak1 | Janus kinase 1 | 1.30 | 1.25 | NM_146145.1 |
| Jak2 | Janus kinase 2 | 2.26 | 1.44 | NM_008413.1 |
| Mx1 | Myxovirus (influenza virus) resistance 1 | 8.02 | 16.69 | NM_010846 |
| Oas1g | 2–5 oligoadenylate synthetase 1G | 2.47 | 3.00 | NM_011852.2 |
| Prkr | Protein kinase interferon-inducible double stranded RNA dependent | 1.69 | 2.63 | NM_011163.2 |
| Prkrir | Protein kinase interferon-inducible double stranded RNA dependent inhibitor repressor of (P58 repressor) | 1.17 | 0.94 | NM_028410.1 |
| Psmb8 | Proteosome (prosome macropain) subunit beta type 8 (large multifunctional protease 7) | 1.41 | 1.54 | NM_010724 |
| Ptpn2 | Protein tyrosine phosphatase non-receptor type 2 | 18.90 | 6.05 | AK076072 |
| Socs1 | Suppressor of cytokine signaling 1 | 1.63 | 1.16 | NM_009896 |
| Stat1 | Signal transducer and activator of transcription 1 | 1.34 | 1.25 | NM_009283.2 |
| Stat2 | Signal transducer and activator of transcription 2 | 3.27 | 3.24 | NM_019963.1 |
| Tap1 | Transporter 1 ATP-binding cassette sub-family B (MDR/TAP) | 1.59 | 2.85 | NM_013683.1 |
| Tyk2 | Tyrosine kinase 2 | 1.22 | 0.97 | NM_018793.1 |
Fold change, lung interferon gene expression 2 or 4 h after NTHi lysate treatment, compared to untreated mice. Accession, GenBank accession number. ND, no gene expression detected at the designated time point.