Table 1.
Parameter | Native | HGI (HGIano)* | HGII (HGIIano)* | K2OsCl6 [K2OsCl6(ano)]* |
---|---|---|---|---|
Diffraction data | ||||
Resolution, Å | 2.1 | 3.0 | 3.0 | 3.0 |
Rmerge,† % | 6.40 | 5.50 | 8.90 | 4.90 |
Total observations | 118,435 | 36,438 | 18,252 | 43,114 |
Unique reflections | 32,383 | 11,199 | 6,581 | 17,078 |
Completeness, % | 95.6 | 96.4 | 88.7 | 94.7 |
MIRAS phasing | ||||
Riso‡(F) | 9.0 | 12.2 | 7.6 | |
(Fano)§ | 2.8 | 5.3 | 3.3 | |
Figure of merit¶ | 0.413 (0.253) | 0.335 (0.128) | 0.270 (0.148) | |
Phasing power‖ | 2.09 (1.02) | 1.82 (0.54) | 1.25 (0.53) | |
Rcullis** | 0.596 | 0.543 | 0.679 | |
(Rkraut)‡‡ | (0.117) | (0.175) | (0.127) | |
Concentration, mM | 1 | 5 | 2 | |
Soaking time, hr | 1 | 4 | 8 | |
Number of sites | 1 | 5 | 1 | |
Final model statistics | ||||
Final R factor | 17.1% | Rfree | 22.1% | |
rmsd bond lengths | 0.006 Å | rmsd bond angles | 1.4° | |
No. water molecules | 300 |
HGI, thimerosal treated data set 1; HGII, thimerosal treated data set 2; rmsd, root-mean-square deviation; MIRAS, multiple isomorphous replacement anomalous scattering.
Statistics for anomalous data sets are shown in parentheses.
Rmerge = Σh Σi |Ihi − 〈Ih〉|/Σh Σi |Ihi|, where h are unique reflection indices and i indicates symmetry equivalent indices.
Riso = Σ ||Fph| − |Fp||/Σ |Fp| for isomorphous replacement (iso) data.
Fano = Σ ||F+| − |F−||/Σ |F+| for acentric anomalous scattering (ano) data.
The overall figure of merit was 0.57.
Rcullis = Σh(|FPH − FP| − |fH|)/ΣH |FPH − FP| for all centric data.
Rkraut = Σ (|| FPH+| − |Fphc+|| + ||FPH−| − |Fphc−||)/Σ(|FPH+| + |FPH−|).
Phasing power = frms/Erms, where frms = [(Σ fH2)/n]1/2 and Erms = |Σ (FPH − |FP + fH|)2/n]1/2.