Table 2.
Rg (Å)a | Dmax (Å)b | MMseq(kDa)c | MMexp(kDa)d | Vp (nm3)e | Ipnorm/Istdnorm,f | NSDg | |
---|---|---|---|---|---|---|---|
10 mM EGTA | 23.7±0.5 | 68.0±2.0 | 50.7 | 45.9±5 | 79±8 | 0.91±0.10 | 0.63±0.02 |
40 μM Ca2+ | 23.1±0.5 | 70.0±2.0 | 50.7 | 46.2±5 | 66±7 | 0.92±0.10 | 0.54±0.01 |
Rg determined from Grunier equation and data that satisfies QmaxxRg<1.3; similar values were obtained using the program GNOM (Svergun, 1992).
Dmax was determined using the program GNOM (Svergun, 1992).
MMseq is the molecular mass calculated from the primary sequence.
Vp is the excluded volume (Porod volume) calculated using PRIMUS (Konarev et al., 2003). Data with S>0.25 were excluded from the calculation (Petoukhov and Svergun, 2006; Porod, 1982).
After superimposing the independently modeled envelopes, pair-wise normalized spatial discrepancy (NSD) values (Volkov and Svergun, 2003) were calculated as part of the DAMAVER routine. NSD values close to unity indicate good agreement between individual models.