TABLE 1.
Nucleotide insertion opposite Gua and N2-ethyl-Gua by DNA pol ι Km and kcat values were determined by quantifying gel band intensities using ImageQuant, and non-linear regression analysis of product versus [dNTP] curves, using SigmaPlot 8.0.2.
Metal ion | dNTP | Km | kcat | kcat/Km | Relative insertion frequencya |
---|---|---|---|---|---|
μm | min–1 | min–1 μm–1 | |||
At template N2-ethyl-Gua | |||||
0.075 mm Mn2+ | |||||
Cyt | 0.10 ± 0.012 | 425 ± 15 | 4.3 × 103 | 1 | |
Thy | 0.030 ± 0.014 | 225 ± 25 | 7.5 × 103 | 1/0.6 | |
2 mm Mg2+ | |||||
Cyt | 36 ± 3 | 74 ± 12 | 2.1 × 100 | 1 | |
Thy | 650 ± 180 | 115 ± 18 | 1.8 × 10–1 | 1/12 | |
At template Gua | |||||
0.075 mm Mn2+ | |||||
Cyt | 0.15 ± 0.020 | 700 ± 40 | 4.7 × 103 | 1 | |
Thy | 0.085 ± 0.020 | 200 ± 15 | 2.4 × 103 | 1/2 | |
2 mm Mg2+ | |||||
Cyt | 49 ± 4 | 112 ± 18 | 2.3 × 100 | 1 | |
Thy | 220 ± 60 | 50 ± 6 | 2.3 × 10–1 | 1/10 |
Relative insertion frequency is calculated as 1/([kcat/Km, correct]/[kcat/Km, incorrect])