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. 2009 Jan 16;284(3):1732–1740. doi: 10.1074/jbc.M807296200

TABLE 2.

Extension from Gua:Cyt, Gua:Thy, and N2-ethyl-Gua:Cyt, N2-ethyl-Gua:Thy base pairs by DNA pol ι Km and kcat values were determined by quantifying gel band intensities using ImageQuant, and non-linear regression analysis of product versus [dNTP] curves, using SigmaPlot 8.0.2.

Metal ion Base pair Km kcat kcat/Km Relative extension frequencya
μm min–1 min–1 μm–1
At template N2-ethyl-Gua
   0.075 mm Mn2+
N2-Et-Gua:Cytb 0.10 ± 0.012 210 ± 7 2.1 × 103 1
N2-Et-Gua:Thy 0.30 ± 0.027 1.0 ± 0.02 3.3 × 100 1/640
   2 mm Mg2+
N2-Et-Gua:Cyt 40 ± 1 90 ± 4 2.3 × 100 1
N2-Et-Gua:Thy 160 ± 40 0.31 ± 0.03 1.9 × 10–3 1/1180
At template Gua
   0.075 mm Mn2+
Gua:Cyt 0.25 ± 0.045 220 ± 10 8.8 × 102 1
Gua:Thy 1.1 ± 0.09 1.3 ± 0.04 1.2 × 100 1/730
   2 mm Mg2+
Gua:Cyt 200 ± 30 110 ± 8 5.5 × 10–1 1
Gua:Thy 170 ± 30 0.18 ± 0.013 1.1 × 10–3 1/500
a

Relative extension frequency is calculated as 1/([kcat/Km, correct]/[kcat/Km, incorrect])

b

Et, ethyl