TABLE 2.
Extension from Gua:Cyt, Gua:Thy, and N2-ethyl-Gua:Cyt, N2-ethyl-Gua:Thy base pairs by DNA pol ι Km and kcat values were determined by quantifying gel band intensities using ImageQuant, and non-linear regression analysis of product versus [dNTP] curves, using SigmaPlot 8.0.2.
Metal ion | Base pair | Km | kcat | kcat/Km | Relative extension frequencya |
---|---|---|---|---|---|
μm | min–1 | min–1 μm–1 | |||
At template N2-ethyl-Gua | |||||
0.075 mm Mn2+ | |||||
N2-Et-Gua:Cytb | 0.10 ± 0.012 | 210 ± 7 | 2.1 × 103 | 1 | |
N2-Et-Gua:Thy | 0.30 ± 0.027 | 1.0 ± 0.02 | 3.3 × 100 | 1/640 | |
2 mm Mg2+ | |||||
N2-Et-Gua:Cyt | 40 ± 1 | 90 ± 4 | 2.3 × 100 | 1 | |
N2-Et-Gua:Thy | 160 ± 40 | 0.31 ± 0.03 | 1.9 × 10–3 | 1/1180 | |
At template Gua | |||||
0.075 mm Mn2+ | |||||
Gua:Cyt | 0.25 ± 0.045 | 220 ± 10 | 8.8 × 102 | 1 | |
Gua:Thy | 1.1 ± 0.09 | 1.3 ± 0.04 | 1.2 × 100 | 1/730 | |
2 mm Mg2+ | |||||
Gua:Cyt | 200 ± 30 | 110 ± 8 | 5.5 × 10–1 | 1 | |
Gua:Thy | 170 ± 30 | 0.18 ± 0.013 | 1.1 × 10–3 | 1/500 |
Relative extension frequency is calculated as 1/([kcat/Km, correct]/[kcat/Km, incorrect])
Et, ethyl