Table 1.
The sample of 32 proteins
| Protein | Abbreviation | PDB |
|---|---|---|
| Acid amylase | ACIDAMY | 2AAA |
| Acyl-CoA dehydrogenase | ACYL | 3MDD |
| Aldolase | ALDOL | 1ALD |
| Aldose reductase | ALREDUC | 1DLA |
| Alcohol dehydrogenase | ADH | 1ADB |
| Alkaline phosphatase | ALK | 1AJA |
| Amylase | AMY | 1PPI |
| Aspartate aminotransferase | AAT | 1AMA |
| Catalase | CAT | 8CAT |
| Citrate synthase | CSYN | 1CTS |
| Cu-superoxide dismutase | CUSOD | 1SDY |
| Cytochrome c | CYT | 1CCR |
| Dihydrofolate reductase | DHFR | 1DHF |
| Elongation factor TU | EFTU | 1EFT |
| Enolase | ENOL | 1EBG |
| Glucose-6-phosphate dehydrogenase | G6PD | 1DPG |
| Gluthatione S-transferase | GST | 1GSS |
| Glyceraldehyde 3-phosphate dehydrogenase | GAPDH | 3GPD |
| Glycogen phosphorylase | GLYPHOS | 1GPA |
| Heat-shock protein 70 | HSP70 | 1ATR |
| Hemoglobin | HEMO | 2DHB |
| High pI amylase | HIAMY | 1AMY |
| Lactate dehydrogenase | LDH | 2LDX |
| Lysozyme | LYS | 1LAA |
| Malate dehydrogenase | MDH | 4MDH |
| Mn-superoxide dismutase | MNSOD | 1MSD |
| Phosphoglycerate kinase | PGK | 3PGK |
| Phosphofructokinase | PFK | 3PFK |
| Phosphoglycerate mutase | PGM | 3PGM |
| Pyruvate kinase | PK | From author |
| Triosephosphate isomerase | TPI | 1TIM |
| Xylanase | XYLA | 1CLX |
The last column lists the PDB entry that yielded the coordinates. Where the PDB files were missing a few coordinates the α-carbon positions were filled-in by linear interpolation. Pyruvate kinase coordinates were supplied by H. Muirhead (University of Bristol, United Kingdom).