Table 2.
The most highly connected gene within transcription modules
| Module | Gene model | Protein ID | Linkage Group | Start bp | End bp | Closest ATG | Annotation |
| green | estExt_fgenesh4_kg.C_LG_X0057 | 814174 | X | 16689588 | At5g46020 | similar to cupin family protein | |
| blue | estExt_fgenesh4_pm.C_LG_V0721 | 831725 | V | 17784177 | At1g76540 | cyclin dependent kinase B2:1 | |
| red | estExt_fgenesh4_pg.C_LG_XII1021 | 823432 | XII | 11985750 | At4g25050 | acyl carrier protein 4 (ACP4) | |
| turquoise | estExt_fgenesh4_pg.C_440087 | 826955 | scaffold 44 | 1069077 | At1g55150 | DEAD box RNA helicase (RH20) | |
| orange | estExt_fgenesh4_pg.C_1580005 | 828416 | scaffold 158 | 67532 | At5g07990 | Transparent Testa 7 (TT7), required for flavonoid 3' hydroxylase activity | |
| grey | estExt_fgenesh4_pg.C_LG_X1117 | 822127 | X | 12350943 | At1g09740 | ethylene-responsive protein, similar to Universal Stress Protein (USP) |
The most highly connected gene within each transcription modules identified using average linkage hierarchical clustering. Module colours refer to Figure 4.