Table 1.
Affymetrix 500 K using CEU HapMap Samples
| Affymetrix 500,000 SNP Panel (CEU) | ||||
| Chromosome | Total number of SNPs | Total number of blocks | Total number Interblock SNPS | Total number of blocks + Interblock SNPs |
| 1 | 31876 | 4447 | 833 | 5280 |
| 2 | 33610 | 4626 | 787 | 5413 |
| 3 | 27588 | 3903 | 723 | 4626 |
| 4 | 25811 | 3514 | 689 | 4203 |
| 5 | 26548 | 3601 | 646 | 4247 |
| 6 | 26550 | 3487 | 604 | 4091 |
| 7 | 21544 | 3061 | 618 | 3679 |
| 8 | 22550 | 3053 | 563 | 3616 |
| 9 | 19086 | 2664 | 541 | 3205 |
| 10 | 23531 | 3046 | 510 | 3556 |
| 11 | 21477 | 2761 | 528 | 3289 |
| 12 | 20549 | 2821 | 499 | 3320 |
| 13 | 15700 | 2116 | 392 | 2508 |
| 14 | 12839 | 1820 | 371 | 2191 |
| 15 | 11560 | 1857 | 396 | 2253 |
| 16 | 12339 | 1944 | 454 | 2398 |
| 17 | 8473 | 1385 | 344 | 1729 |
| 18 | 11966 | 1748 | 374 | 2122 |
| 19 | 5177 | 954 | 305 | 1259 |
| 20 | 10292 | 1519 | 331 | 1850 |
| 21 | 5873 | 843 | 204 | 1047 |
| 22 | 5053 | 828 | 213 | 1041 |
| Total | 399,992 | 55,998 | 10,925 | 66,923 |