Table 1.
NMR and refinement statistics for DsbB protein structures.
DsbB[CSSC] | DsbB[CSSC] – UQ2 | |
---|---|---|
NMR distance and dihedral constraints | ||
Distance constraints | ||
NOEs | ||
Intra-residue | 41 | 44 |
Inter-residue | ||
Sequential (|i − j| = 1) | 191 | 191 |
Medium-range (1 < |i − j| < 5) | 216 | 216 |
Long-range (|i − j| > 4) | 39 | 39 |
Intermolecular | NA | 10 |
Ambiguous | 14 | 14 |
Hydrogen bonds | 97 | 97 |
Paramagnetic relaxation enhancements | ||
Upper bound | 871 | 872 |
Lower bound | 273 | 274 |
Total dihedral angle restraints | ||
ϕ | 144 | 144 |
ψ | 151 | 151 |
Residual dipolar couplings | ||
1DHN | 114 | 114 |
1DNC’ | 109 | 109 |
1DC’Cα | 114 | 114 |
Structure statistics | 20 structures | 20 structures |
Violations (mean and s.d.) | ||
Distance constraints (Å) | 0.0099±0.0008 | 0.0098±0.0009 |
Dihedral angle constraints (°) | 0.204±0.031 | 0.206±0.027 |
Residual dipolar couplings (Hz) | ||
HN | 2.64±0.08 | 2.63±0.06 |
NC’ | 0.049±0.001 | 0.049±0.001 |
C’Cα | 1.20±0.02 | 1.21±0.01 |
Deviations from idealized geometry | ||
Bond lengths (Å) | 0.0017±0.0000 | 0.0017±0.0000 |
Bond angles (°) | 0.402±0.003 | 0.403±0.002 |
Impropers (°) | 0.248±0.005 | 0.250±0.004 |
Ramachandran plot statistics* (%) | ||
Residues in most favored regions | 86.9 | 90.0 |
Residues in additionally allowed regions | 10.0 | 9.2 |
Residues in generously allowed regions | 3.1 | 0.8 |
Residues in disallowed regions | 0 | 0 |
Average pairwise r.m.s. deviation*(Å) | ||
Heavy | 1.75 | 1.67 |
Backbone | 0.80 | 0.70 |
Statistics applied in structure rigid regions (aa 4–97and 114–164, see Figure 3C).