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. Author manuscript; available in PMC: 2009 Aug 1.
Published in final edited form as: Pediatr Res. 2008 Aug;64(2):147–153. doi: 10.1203/PDR.0b013e31817c5507

Table 4.

Gene ontology classification using DAVID to group genes of similar functional families.

Group # genes Enrichment score Type of gene
Up regulated*
1 71 6.37 Transcription regulatory / nuclear
2 14 5.8 RNA binding or RNA processing proteins
3 23 5.1 Primary metabolism / Protein metabolism
4 24 4.27 Protein kinases
5 10 2.36 Vesicle associated intracellular transport
Down regulated**
1 18 5.62 Transmembrane protein
2 19 4.47 Immunoglobulin domain containing transmembrane protein
3 7 4.4 Cytoskeleton / intermediate filament protein
4 4 3.16 Membrane protein
5 6 3.01 Epidermal morphogenesis
*

There were 472 upregulated Affymetrix® IDs with 384 matching DAVID dataset entries. Of these 142 were grouped.

**

There were 201 downregulated Affymetrix® IDs with 170 matching DAVID dataset entries. Of these 54 were grouped.